Microchaete diplosiphon: NIES3275_29710
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Entry
NIES3275_29710 CDS
T09944
Symbol
groEL_2
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES3275_29710 (groEL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdp03019
]
NIES3275_29710 (groEL_2)
03110 Chaperones and folding catalysts [BR:
mdp03110
]
NIES3275_29710 (groEL_2)
03029 Mitochondrial biogenesis [BR:
mdp03029
]
NIES3275_29710 (groEL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdp04147
]
NIES3275_29710 (groEL_2)
Enzymes [BR:
mdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NIES3275_29710 (groEL_2)
Messenger RNA biogenesis [BR:
mdp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NIES3275_29710 (groEL_2)
Chaperones and folding catalysts [BR:
mdp03110
]
Heat shock proteins
HSP60 / Chaperonin
NIES3275_29710 (groEL_2)
Mitochondrial biogenesis [BR:
mdp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NIES3275_29710 (groEL_2)
Exosome [BR:
mdp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NIES3275_29710 (groEL_2)
Exosomal proteins of other body fluids (saliva and urine)
NIES3275_29710 (groEL_2)
Exosomal proteins of breast cancer cells
NIES3275_29710 (groEL_2)
Exosomal proteins of colorectal cancer cells
NIES3275_29710 (groEL_2)
Exosomal proteins of bladder cancer cells
NIES3275_29710 (groEL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAY90951
LinkDB
All DBs
Position
complement(3712410..3714047)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKRIIYNENARRALERGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGID
KAANFLVEKIAQHARPVEDSKAIAQVGSISAGNDEEVGQMIAQAMDKVGKEGVISLEEGK
SMTTELEITEGMRFDKGYISPYFATDPERMEAVFDEPFILLTDKKIALVQDLVPVLEQVA
RAGRPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAILTGGQLI
TEDAGLKLDNTKLDSLGKARRITITKDNTTIVAEGNEVAVKARIDQIRRQIEETESSYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL
TPQLEEWANSNLSGEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKEFNVGYNA
ATNEFVDLFVAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAAGGGMGG
GDFDY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcattatctacaacgaaaacgcccgtcgcgccctggaacgaggcatggat
attctagctgaagcagtggctgttacccttggccctaaaggtcgtaacgtcgtgctagag
aagaaatttggcgcaccgcaaatcgtcaatgatggcgtaaccattgccaaagaaattgaa
ttagaagaccatattgaaaatactggcgtggctttgattcgccaagcagcttctaaaacc
aacgacgcggcgggtgatggtaccaccacagctaccgttttggctcacgcaattgtgaaa
gaaggcttgcggaacgttgctgctggcgcaaatgcaattttattgaagcgtggtattgac
aaagccgctaacttcttagtagaaaagattgctcaacacgctcgtcctgtagaagattcc
aaggctattgctcaagttggttccatctccgccggtaacgacgaagaagtcggtcagatg
attgcccaagcaatggataaggtaggtaaggaaggcgtaatttccctagaagaagggaaa
tctatgaccaccgaactggaaatcaccgaagggatgcgctttgacaaaggctatatttct
ccctacttcgctaccgacccagaacggatggaagcagtcttcgatgagcctttcattctg
ttaaccgataagaaaattgctttggtacaagaccttgtacccgtgcttgagcaagtagca
cgtgctggtcgtcccttagtaatcattgctgaagatattgaaaaagaagctttggcaact
ctggtagttaaccggttacgtggtgtactcaacgttgctgctgttaaggctccaggattt
ggcgatcgccgcaaagctatgctggaagatatcgctatcctcaccggcggtcaactaatc
accgaagatgctggtctcaagctagataacaccaagctagatagcctaggtaaagctcgc
cgcatcaccattaccaaagacaacaccacaattgttgctgaaggtaatgaagttgctgtt
aaggctcggattgaccaaatccgtcgtcaaattgaagaaaccgaatcttcctacgacaaa
gaaaaactgcaagaacgtctagctaaactagctggtggtgttgctgtagttaaagtcggt
gcagctaccgaaaccgaaatgaaggataagaagctgcgcttagaagacgctatcaacgct
accaaagctgctgttgaagaaggtatcgttcctggtggtggtacaaccctcgctcactta
actcctcaactggaagaatgggctaacagcaacctctctggtgaagaattaactggtgcg
ttgattgttgctcgtgctttacctgctcctctgaagagaattgcagaaaacgcaggtcaa
aacggcgctgtaattgctgaacgcgtaaaagaaaaagaattcaacgttggctacaacgct
gcaaccaatgagtttgttgacttgtttgtagctggtattgttgaccctgctaaggtaact
cgttctgctctgcaaaacgctgcttccattgctggtatggtgttgacaaccgaatgtatc
gtagttgacaagcctgaacccaaagatgctgctcctgctgctggtggcggtatgggtggc
ggcgacttcgattactaa
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