Microchaete diplosiphon: NIES3275_36260
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Entry
NIES3275_36260 CDS
T09944
Name
(GenBank) ABC transporter-related protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mdp
Microchaete diplosiphon
Pathway
mdp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES3275_36260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdp02000
]
NIES3275_36260
Transporters [BR:
mdp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES3275_36260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Secretin
AAA_18
CLN3
AAA_24
AAA_22
AAA_16
MMR_HSR1
RsgA_GTPase
AAA_23
DUF5344
APS_kinase
AAA_28
nSTAND3
Dynamin_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAY91602
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Position
4668110..4669861
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AA seq
583 aa
AA seq
DB search
MLQSRRLAKLSAYLRPHWREAILGIIALLTVNGLGVYIPWLIRGCVDRLSTNFDWYEILN
YVVVIFLLSSAMWLIRMSSRIWLFGVGREVEFDLKQRIFEHLLKLEPSYFATHTIGDLIS
RATSDVENIKRLLGFAVLSLANTFFAYVLTLPVMLAISVDLTLASLAVYPLMFLLVHLFS
DRLRKQQTVVQEQLSDISELIQEDISGIALIKIYAQEENERRAFAEKNQQLLTANLELAK
SRNTLFPLIGGLANISSLIILWLGASRIAAGNLAVGDFLALLIYVERLVFPTALLGFTIT
AYQRGEVSIDRLESILSVTPKIQDADDVVHLPKTQVKGKLRAKNFTYTYPGATTPALDNI
NFTINPGETVAIVGAIGSGKSTLANALPRLLEIEPGQLFLDGTDITKIALADLRAAIAYV
PQDSFLFSTTIRNNIRYGDPLSEQENVEYVAKMAQIESEINNFTQKYDTIVGERGITLSG
GQRQRTALSRAMLVDAPVLILDDALSSVDNQTATQILKNLSTGTVKKTVVFITHQLSAAA
AADRIFVMEKGKIVQIGTHLTLVQKEGLYRTLWSQHQIEELLR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttacaatctcgacgacttgctaaactcagtgcttacctgcgtccccattggcgggag
gcaattttaggcattatagctttgctgactgtcaatggattaggcgtttatataccttgg
ttgattcgcggttgcgttgacagactttcaacaaatttcgactggtatgaaattctcaat
tacgtagtcgtcattttcttgctcagttcagcaatgtggttaattcggatgtcttcccgc
atttggctgttcggagtgggaagagaggtagaatttgatttaaaacaacggatttttgaa
catttactgaagctagagccttcttacttcgccacacatactatcggtgatttaattagt
agggctactagtgatgtcgaaaatatcaagcggttgttgggttttgccgtcctgagttta
gcaaatacattttttgcctacgttctaacattgcctgtgatgttggcaattagcgtagat
ttgacattagcctcgctggcagtataccccttaatgttcttgttggtgcatttgtttagc
gatcgcctacgtaaacaacaaactgtagttcaagaacaactatctgacattagcgaactc
attcaagaagatattagtggtattgccttaattaaaatttatgctcaagaagaaaacgaa
cgtcgcgccttcgccgagaaaaatcagcagctattgacggctaacttggaactcgcaaaa
agccgcaatacactgtttcccctgattgggggtttagccaatattagttcactgataatt
ctctggttgggagcatcccgcattgcggcgggaaacctagctgtgggggattttttagca
ctcctaatttatgtcgagcgtttagtttttcccactgctttgttagggtttaccattacc
gcctaccaacgaggtgaggtgagtattgatcgcttagaatcaattctcagcgttacaccc
aaaattcaagatgcagatgatgttgttcatctaccaaaaacccaagttaaagggaaactg
agagccaaaaatttcacctatacatatccaggcgctaccaccccagctttagataatatc
aacttcacgattaatcctggggaaaccgtggcaattgttggtgctattggttctgggaaa
tctaccttagccaacgccttacctcgcttattagaaattgagccaggacagttatttcta
gatggaacggacattaccaaaatagccttagccgatttaagagctgcgatcgcctatgtc
ccccaagatagttttctgttcagcaccaccattagaaataatatccgctacggcgaccca
cttagcgagcaagaaaatgtagaatacgtagcgaagatggcgcaaattgaatcagaaatt
aacaattttacccaaaagtatgacactatagttggtgagcgggggattactctttctgga
ggtcaaagacaacgtactgctttatctagagctatgttagttgatgccccagtgttaatt
ttggatgatgctctttctagcgtcgataatcaaacagctacccaaatcctcaaaaatctt
tcgactggtacagtcaagaaaactgtcgtttttattacgcatcaactatcggcggcggct
gctgctgaccgaatttttgtgatggaaaaggggaaaatagtccaaataggtactcactta
actcttgtgcaaaaagaaggcctttacagaactttgtggagtcaacatcaaatagaggaa
ttactacgttag
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