Microchaete diplosiphon: NIES3275_40210
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Entry
NIES3275_40210 CDS
T09944
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES3275_40210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_40210
Enzymes [BR:
mdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NIES3275_40210
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES3275_40210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAY91990
LinkDB
All DBs
Position
5153218..5153898
Genome browser
AA seq
226 aa
AA seq
DB search
MSSETQLSLFDDSTFNQRDLIPTDAKIPIPANTYSDMTELAQHCNQCHRCGLGNNRTHAV
VGRGNLKALIMVVGEAPGQNEDETGLPFVGKSGQLLEKILASVNLSTETDVYICNINKCR
PPENRVPTTEEMAACLPYLLEQIRLVDPKIILLTGATAVKGLTNDKRGITKIRGQWMEWQ
GRLCMPIFHPSYLLRNPSREVGGPKWLMWQDIQAVRAKYDKIRLTH
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaaacccaactgagcctattcgacgattcaacttttaatcagcgagatctg
attcccacagacgctaaaattcctatacctgccaatacctattctgatatgacagagttg
gcacaacactgtaatcagtgccatcgttgtggattaggaaataaccgcactcatgctgtg
gtaggaagagggaacctcaaagcgctaattatggttgtgggggaagcaccaggtcaaaac
gaagacgaaacaggtttaccatttgtaggtaaatcagggcagttgttagagaaaatcttg
gcatctgtaaatctgagtactgagactgatgtttacatttgtaatatcaacaaatgtcgc
ccgccagaaaatcgagtgccaactacagaagaaatggcagcttgcttaccttacttatta
gaacaaattcgtttagttgacccaaaaatcattttattaactggtgcaactgcggttaaa
ggtttaactaacgataagcgaggcattacgaaaattcgcggacagtggatggaatggcag
ggacgtttgtgtatgccaatttttcatccttcctatctactgcggaacccttctagggaa
gtaggcggcccaaaatggttgatgtggcaggatatacaagcagtgcgtgctaaatacgac
aaaattaggctaactcattaa
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