Microchaete diplosiphon: NIES3275_40900
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Entry
NIES3275_40900 CDS
T09944
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mdp
Microchaete diplosiphon
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_40900
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES3275_40900
Archaeal homologous recombinant proteins
NIES3275_40900
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
HNOB
Motif
Other DBs
NCBI-ProteinID:
BAY92059
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Position
5233877..5235130
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AA seq
417 aa
AA seq
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MIKILHLSDIHMGSGFSHGRINPATGLNTRLEDFVNTLSICIDRALTDNVDLVIFGGDAF
PDATPPPYVQEAFASQFRRLVDGNIPTVLLVGNHDQHSQGLGGASLCIYRTLGVRGFVVG
DTVTTHRIQTRSGKVQVITLPWLTRSTLMTRQETESLSLAEVNQLLTERLQLVLESEIRR
LDPQVPTVLLAHLMADNASLGAERFLAVGKGFTLPLSLLTRPCFDYVALGHVHRHQNLNK
SNDPPVIYPGSIERVDFSEEKEDKGYVLIELEKGQANWEFCPLSVRTFRTIEVDISKADD
PQAAILKAIAKHDIQDAVIRLIYKLRSEQLDLIDNSSLHDALSSAHTYTIHPELLSQLAR
PRIPELTASSSIDPMEALKTYLSNREDLKDIAASMVEAAQKLLADDVEVWLEGAGRD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatccttcatctttccgatatccacatggggagtggtttctcccacggacgc
attaatccagcgacaggattaaatacgcggctggaggattttgtcaatacattatctatt
tgtattgaccgagcattaacagataatgttgatctagtgatttttggcggtgatgctttt
cctgatgctacgccacccccgtatgtgcaagaagcttttgctagtcaattccgccgtttg
gtggatggtaatattccgacagtgctgttagtgggaaaccatgaccagcattcccaaggg
cttggcggggcaagtttgtgtatttaccgcacgttgggagtgcgggggtttgtggtggga
gatacggtgacaactcatcgcatccaaacccgcagtggtaaagtccaagttattaccctc
ccttggctgacgcgttcgacgttgatgactcgccaagagactgaaagtttatcacttgca
gaagttaatcagctgttaactgaacgtctgcaactggttttagaatcggaaattcgccgt
ctcgatccacaagtgcctactgtgcttttagcacatttaatggctgataatgcttctttg
ggagccgaaaggtttttggctgtaggtaaaggctttactttaccgctatctttattgacg
cgtccatgtttcgattatgtggctttgggacatgtccaccgtcaccaaaatttaaataaa
tctaatgacccgccagtaatctatccaggaagcattgagcgggtagattttagtgaagaa
aaagaagataaaggttatgtgctcatagaattagagaaaggtcaggcaaattgggaattt
tgtcccttatctgtgaggactttccgcacaattgaagtggatatctcgaaagcagacgat
ccacaagcagctatcttaaaagcgatcgcaaaacatgatatccaagatgctgtcatccgc
ttaatctataaactgcgttccgaacagctagatttaattgataactcctcgctccatgat
gcgttaagttcggctcatacctacacaattcatccagaattactcagtcagttagctaga
ccccgcatccccgaactgactgccagtagtagcatcgatccaatggaagcattaaaaact
tacttgagtaatcgcgaagacctcaaagatatagcagcctcaatggtagaagctgcacag
aagttactcgcggatgatgtagaagtatggttggaaggggctgggagggattag
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