Microchaete diplosiphon: NIES3275_41930
Help
Entry
NIES3275_41930 CDS
T09944
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mdp
Microchaete diplosiphon
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdp03016
]
NIES3275_41930
Enzymes [BR:
mdp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIES3275_41930
Transfer RNA biogenesis [BR:
mdp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES3275_41930
Prokaryotic type
NIES3275_41930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAY92161
LinkDB
All DBs
Position
complement(5357812..5358684)
Genome browser
AA seq
290 aa
AA seq
DB search
MQGFLNLNKPFDWTSHDCVARVRKLLRLKRVGHAGTLDPAATGVLPIAFGRATRLLQYLP
GNKAYNATIRFGVQTTTDDLQGEVITSAPCPQLSLTEVETALPQFLGKIEQIPPSYSAIQ
VDGQRLYDLARRGEKVEVPVRTVEVLQMEILAWREGDFPELDIAIACGSGTYIRAIARDL
GAVLQTGGTLAALTRTASSGFDLAESLTLSDLETQLQAGTFQPIPLDAPLQHLPAVVLPA
TSAQKWCQGQRISVTTDISGNVRVYEEPTRFLGIGQVNDEVLIPTTVVEI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggttttcttaacttaaacaaaccatttgactggacttctcatgattgtgtggcg
cgggtgcggaaactcctgcgcctcaaacgtgtgggacatgcgggaactttagatcccgca
gctacgggggttttacccattgcttttggtagagcgacgagattattacaatatttgcca
ggtaataaagcttacaatgccactattaggtttggtgtgcagacaacaaccgatgattta
caaggggaagtcattacttctgcgccttgtcctcagttgagtttaactgaggtagaaaca
gccttaccgcaatttttaggaaaaattgagcagattccgcctagttatagcgccattcaa
gtagatggacagcgtttatatgatttagcaaggcggggggaaaaggtggaagttcctgta
cgcacagtagaagtcttgcagatggagattttagcttggcgagaaggagattttccggaa
ttagatattgcgatcgcttgtggatctgggacatatattagagcgatcgcgcgggattta
ggtgcagttttacaaactggcggaaccctagccgctttgacgcgtactgcaagtagtggg
tttgatttagcagaaagtttaactttgagtgatttagaaactcaactgcaagccgggaca
tttcagccaattccccttgatgcacctttgcagcatttacctgcagtggttttaccagca
acatctgctcaaaaatggtgtcaaggacagcgaatttccgtaactacagatatatctgga
aatgtgcgagtttacgaagaaccaactcgttttttagggattggacaagttaatgatgaa
gtattgatcccaacaacagttgtggagatttaa
DBGET
integrated database retrieval system
