Microchaete diplosiphon: NIES3275_46120
Help
Entry
NIES3275_46120 CDS
T09944
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mdp
Microchaete diplosiphon
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdp03009
]
NIES3275_46120
Enzymes [BR:
mdp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NIES3275_46120
Ribosome biogenesis [BR:
mdp03009
]
Prokaryotic type
ribosomal protein modification factors
NIES3275_46120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
CLP1_P
AHD
Motif
Other DBs
NCBI-ProteinID:
BAY92576
LinkDB
All DBs
Position
5896078..5897397
Genome browser
AA seq
439 aa
AA seq
DB search
MGDKPTIAISHLGCEKNRVDTEHMLGLLVKAGYGVDSNEELADYVIVNTCSFIEAARAES
VKTLVELAEANKKIVITGCMAQHFQEQLLEELPEAVAVVGTGDYHKIVNVIERVEQGERV
KQVSIEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPFLRGNQRSRTIESIVA
EAQQLASQGVQEIILISQITTNYGLDIYGKPKLAELLRALGEVDVPWIRMHYAYPTGLTP
DVIAAIQETPNVLPYLDLPLQHSHPDILRAMNRPWQGRVNDGIIERIKKELPSAVLRTTF
IVGFPGETEEHFEHLLQFVQRHEFDHVGVFTFSPEEETPAYKLPNQLPQEVMDDRRNRLM
ELQQPIAWQKNQQEVGKIVDVLIEQENPETGELIGRSGRFAPEIDGQIYVVGQAKLGTIV
PVEIQSADTYDLYGQIVKS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaagccaacaattgcaatttctcacctaggctgcgagaaaaatagagttgat
acagaacatatgctagggctgctggtcaaagcaggctatggcgtagatagtaatgaagaa
ttagccgattacgttattgtcaatacctgtagttttattgaagcagcccgagcagaatct
gttaaaactttggtagagttggcagaggcgaacaaaaaaatcgtgatcacaggctgtatg
gcccagcacttccaagaacaattattggaagagttaccagaagccgtggccgtagtaggt
acaggcgattatcacaaaattgtaaatgtaattgagcgggtagaacaaggagaacgggta
aagcaggttagtattgaaccaacctatattgccgatgaaactacaccgcgctaccgcact
acaaccgaaggcgtagcttatctgcgagtggccgaaggatgtgattatcgttgtgcgttt
tgtattattccttttttgagaggaaaccagcgatcgcggacgattgaatccattgttgct
gaagcccagcagttagctagtcaaggggtacaagaaattattctgatttcccaaatcact
actaattatggtttggatatttacggcaagcccaagttagccgaattattgcgcgccttg
ggagaagtagatgtaccgtggatcagaatgcattatgcttatcccacggggttgacacca
gatgtcatagcagcgatccaagaaacaccaaatgttttaccttacttagatttgccttta
caacattctcatcctgacattctccgcgccatgaaccgtccctggcaagggcgagtcaac
gatgggattattgaacgcattaaaaaagagctaccatcagcggtactaaggacaacattt
attgttggtttccctggagagacagaagagcattttgagcatttacttcagtttgtccag
cgacatgaatttgaccatgtaggcgtgtttactttttctcccgaagaagaaaccccagcc
tacaagctgccaaatcagttacctcaagaagtgatggacgatcgccgaaaccgcctcatg
gaactccaacagccgattgcttggcagaagaatcaacaggaagtaggcaaaattgttgat
gtcctgattgagcaagaaaatccggaaactggagaattaattggtcgttctgggcgattt
gccccagagattgatggacaaatctatgtcgttggccaagcgaagttaggaacaatcgtg
ccagtagagatccaaagtgcggatacatacgacctctacggtcaaattgtcaagagctaa
DBGET
integrated database retrieval system
