Microchaete diplosiphon: NIES3275_49610
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Entry
NIES3275_49610 CDS
T09944
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03420
Nucleotide excision repair
mdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES3275_49610
03430 Mismatch repair
NIES3275_49610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_49610
Enzymes [BR:
mdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES3275_49610
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES3275_49610
MMR (mismatch excision repair)
Other MMR factors
NIES3275_49610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
Viral_helicase1
AAA_11
ResIII
AAA_30
DUF3553
GpA_ATPase
GA
CarD_TRCF_RID
SinI
Motif
Other DBs
NCBI-ProteinID:
BAY92924
LinkDB
All DBs
Position
6372500..6374821
Genome browser
AA seq
773 aa
AA seq
DB search
MTTTIDFLSHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLILKHRVAPENILA
VTFTNKAAREMKERIQKLFAEEEAIKQHGTRFDLLTEYQQTQLRSQVYRETIKDLWCGTF
HSLFSRILRFDIEKYQDEKGRRWNKNFSIFDESDAQSLVKDIVTKQLNLDDKKFDHRSVR
YAISNAKNQGLSPQQFEQEQPNYRGRVIAQVYNSYQDRLAQNNALDFDDLILIPTRLFQQ
NEQVLGYWHRKFCHILVDEYQDTNRTQYDLIRLLVTNGEDRKSEWNWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQNDFGDGLPDADTRTMVKLEENYRSCENILQAANELIENNTQRI
DKVLRPTRGAGEQIYCHKADNELDEAAFIIDQIRSLEYQNPEINWGSFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMRFYDRKEIKDVIAYLRAIANPADTVSLLRVINTPRRGIGKTT
IDALINASQQLGTTLWEILSDDTSVNTLAGRGAKSVKGFAEMISRWQGEIGTMPAAEIVQ
GILEDSGYVQDLLSQGTDESQDRIQNVQELYNAVLQFQEENEDATLQGFLQSTALSSDLD
NLKEGKTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLSDPASLEEERRLCYVGITR
AQERLYLSHARERRLYGSREPAVRSQFLDELPEELLANGRRGRQNYTKPSVATNGNGKQN
WQVGDRVLHKSFGVGEITHVFGDGHKLSVAIKFANLGQKIIDPRVAQLQKVDD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaactattgactttctcagccatcttaaccccagccaacgtcaagccgtagaa
cattactgcggcccgctgctagttgtggctggtgcaggttccggtaaaacacgcgcgttg
acttatcggattgctaacctgattctgaaacatcgtgtagctcccgaaaatattttagcg
gtgacttttacgaataaagccgctagggagatgaaagaaaggattcaaaagctgtttgcg
gaagaagaagcaattaaacaacacggaactaggtttgatttattgacggaatatcaacag
acgcaactgcgatcgcaagtttaccgtgaaaccattaaagatttatggtgcggtactttt
cacagtctgttttctcgcattctccgatttgatattgagaagtaccaagacgaaaaaggt
cggcgatggaataaaaatttctctatttttgatgaatctgacgctcaaagtttagttaaa
gatattgttacaaaacagctaaatttagacgataagaaatttgaccatcgttcggtacgc
tatgcaattagtaacgcgaagaaccaagggttatcaccacaacaatttgaacaggaacaa
ccaaattatcgcggaagggtaattgctcaagtttataattcctatcaagataggttggca
caaaataacgcccttgattttgatgacttaattctgattcctaccaggctatttcagcaa
aacgaacaggtattaggttattggcatcgtaaattctgccatattttagttgatgaatat
caagataccaaccgcactcagtatgacttaattcgcttgttggttactaatggcgaagat
agaaagagtgaatggaattggcaaaatcgctcagtgtttgttgtcggtgatgctgaccag
tcaatttactcttttagaatggcagactttaccatattgctagagtttcagaatgatttt
ggtgatgggttaccagatgcagataccagaacaatggtgaaattagaagaaaactatcgc
tcttgtgaaaatattctgcaagcggctaatgaactgattgagaataatactcaacggatt
gataaagttctgagaccgacgcggggcgcaggtgagcaaatttattgtcacaaagcagat
aatgaactagatgaagccgcgtttatcatcgatcaaattcgctctttagaatatcaaaac
cccgaaataaactggggcagttttgccatactttatcggacaaacgcccaatcgcgacct
tttgaagaacttttagtgaaatatcaaatcccttacacagttgtggggggaatgagattt
tacgatcgcaaagaaattaaagatgttatagcttatttaagagcgatcgcaaatcctgca
gatactgtgagtttgttacgagttatcaatactccccggcgtggtatcggtaaaaccaca
attgatgctttgattaacgcctcccagcaattagggacaactctctgggaaatattgtca
gacgatacttcagttaataccttagcgggacgaggtgcgaaatcggtcaaaggctttgcc
gaaatgattagccgttggcaaggcgaaatcggtaccatgccagcagcagagattgttcaa
ggtatattagaagactctggttatgtgcaagacttgctcagtcagggtacagacgaatcc
caagatagaatccaaaacgtccaagaactttacaacgctgtattgcaattccaagaagaa
aacgaagatgctaccctacaaggatttttgcaaagtactgccctgagttccgatttagat
aatttaaaagaaggcaaaacagcagtttctttgatgactttgcacgcttctaaagggtta
gaatttcccgtagtctttttggtgggattggaacagggactattccctggctaccgttcc
ctcagcgatcctgcatctttagaagaagaacgccgcctgtgttatgtgggaattacccgc
gcccaagagaggttatatttatcacacgctcgtgaacgcaggctttacggttcgcgtgaa
cctgcagtgcgatcgcaatttttggacgaattaccagaagaattattagctaatggtcgc
agaggtcgtcaaaactatactaaaccctctgttgctaccaatggtaatggtaaacagaat
tggcaagtaggcgatcgcgttttacataaatcttttggagtgggtgaaatcacccatgta
tttggggatgggcacaagctttctgtagctattaaatttgcgaatttgggacaaaaaatt
attgaccccagagtagcgcagttacaaaaagtagatgattga
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