Microchaete diplosiphon: NIES3275_49730
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Entry
NIES3275_49730 CDS
T09944
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mdp
Microchaete diplosiphon
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdp03016
]
NIES3275_49730
Enzymes [BR:
mdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NIES3275_49730
Transfer RNA biogenesis [BR:
mdp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NIES3275_49730
Prokaryotic type
NIES3275_49730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAY92936
LinkDB
All DBs
Position
6387988..6388947
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AA seq
319 aa
AA seq
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MQITFLGTSSGVPTRARNVSSVALRLPQRAELWLFDCGEGTQHQLLRSELKISQLSRIFI
THMHGDHIFGLMGLLASCGLAGNVQRVDLYGPPGLNEYIQASLRYSYTHFSYPVKVHAIR
PGVIYEDDEFTVTCGPLHHRITSFGYRVAEKDRAGRFDVDKAKELQIPPGRVYGQLKRGE
VVTLNDGRVIDGKDLCGPTEIGRKIAYCTDTVFCEGAVELAQDADVLIHEATFAHQDADM
AFQRLHSTTTMAAQTALAAQAHRLIMTHFSPRYAPGNVIELKDLLKEARAIFPNTDMAHD
FMIYDVPRRRELELTEASV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatcacatttttagggacaagttctggtgtacccacaagagcgcgtaatgtttct
agtgttgccctcagattaccccaaagggcagaactgtggttattcgattgtggtgaaggt
actcagcatcagcttttgcggagtgaactgaaaattagccaactatcccgaatttttatt
acccatatgcacggcgaccacatctttggtttgatgggactgcttgctagttgtggtttg
gctggaaacgtgcaacgagttgatctctatggcccgccagggttaaatgaatatatccaa
gcatccttacgttactcttacacgcacttttcctaccctgtcaaagttcacgccatccgt
ccaggggtaatttatgaagatgatgagttcacagttacctgtggccctttgcatcatcgc
attacaagttttggctaccgagttgcagaaaaagaccgcgccggacgctttgatgttgat
aaagccaaggaattacaaataccgccaggacgagtttatggtcaactcaagcgcggtgaa
gtagtaactctcaacgatgggcgagtaatagatggtaaagacctgtgcggccctaccgaa
attggacgcaaaattgcttattgtacagacacagttttttgtgaaggtgcagtggaatta
gcgcaggatgcagatgtgttaattcacgaagcaacttttgctcatcaagatgcagacatg
gcttttcaaaggttgcattccaccaccacaatggcagcacaaaccgctttagctgctcaa
gcacatcgcctgatcatgactcattttagcccccgttatgcaccaggtaatgttatagag
ttgaaagatttactgaaagaagctagagcaattttccccaatacagatatggctcatgat
ttcatgatttatgacgtacctagacgacgggagttagagttaaccgaagccagcgtataa
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