Microchaete diplosiphon: NIES3275_51750
Help
Entry
NIES3275_51750 CDS
T09944
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp00061
Fatty acid biosynthesis
mdp00071
Fatty acid degradation
mdp01100
Metabolic pathways
mdp01212
Fatty acid metabolism
mdp02024
Quorum sensing
mdp04146
Peroxisome
Module
mdp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NIES3275_51750
00071 Fatty acid degradation
NIES3275_51750
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NIES3275_51750
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES3275_51750
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mdp01004
]
NIES3275_51750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdp04147
]
NIES3275_51750
Enzymes [BR:
mdp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NIES3275_51750
Lipid biosynthesis proteins [BR:
mdp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NIES3275_51750
Exosome [BR:
mdp04147
]
Exosomal proteins
Exosomal proteins of breast milk
NIES3275_51750
Exosomal proteins of breast cancer cells
NIES3275_51750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAY93138
LinkDB
All DBs
Position
6627155..6629128
Genome browser
AA seq
657 aa
AA seq
DB search
MSKTQSAAIYLSNISEQERLALKRLKDYTHINAIPEIWPLAAKSFGDTVALHNPHAKPEV
VITYKQLAELIQKFAAGLQVLGVKAGDRLSLIADNSPRWFVADQGIMTAGAVDAVRSSQA
EKEELLFIIANSGSTGLVLEDLKTLQKLRDRINDLPVQFVILLSDETPPEDSLKILNFSQ
LLEIGANNAWQPVEYNQDNLATLIYTSGTTGKPKGVMLAHSNLIHQITTMGTVVQPNVGD
IALSILPSWHSYERTVEYFLLSQGCTQIYTNLRAVKNDLKNRKPHFMVAVPRLWESIYEG
AQKQFREQPANKQRLINFFFEKSDRYIKAKRIAEGVSLEHLESSAVEKLTAKIQAAALFP
LHALGERLVYAKVREATGGRIKQVISGGGALPKHIDMFFEIIGVEILQGYGLTETSPVTN
VRRPWHNVRGSSGQTLPATETKIVDPETRKPLPIGERGLVLLKGPQIMQGYYQNPEATAK
AIDADGWFDSGDLGWLTPQNDLVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIML
VGQDQRSLGALIVPNLEALVKWAETQNIDLSKPNEDVTASASQKIDLESKIIQELFRKEL
NREVQNRPGYRADDRIGPFKLIPEPFSIENGLMTQTLKIRRHVVSERYRDIVNAMFA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaactcaatctgcggcgatttacttatctaatattagtgaacaagaacgttta
gcattaaagcggttaaaagattacacccatatcaatgcaatcccagaaatttggccctta
gcagccaagtcatttggggatacagtggcgttgcacaatccccatgctaaaccagaggtg
gtgattacttacaagcagttagcagagctaattcaaaaatttgcggctgggttacaggtg
ttaggagtcaaagcaggcgatcgcctgtcgttaattgccgataatagtcccaggtggttt
gtagccgatcaaggaattatgacggctggcgctgtggatgcggtgcggagttctcaagcc
gaaaaggaagaattactgtttattattgctaatagcggcagtacagggctagtactagaa
gatttaaagacactgcaaaaattgcgcgatcgcatcaacgatttacccgtgcaatttgtg
attttgctttccgatgaaacaccgccagaagatagcctgaaaatcctcaatttttcgcaa
ttgctagaaattggcgctaacaatgcttggcaaccagttgagtacaatcaagacaattta
gccacactcatttatacttccggtactacaggcaaacccaagggtgtgatgctggctcat
agcaatttaattcatcaaatcacaactatgggtaccgtagtacagcctaacgtcggtgat
attgccttgagtattcttccgagttggcatagctatgaaagaaccgtagagtatttctta
ctttctcagggttgtactcaaatttataccaacttgcgtgctgtcaaaaacgatttaaaa
aaccgcaaaccccattttatggtggctgtaccgcgcctctgggaatcaatttatgaagga
gcgcaaaaacagtttcgcgaacaaccagctaataagcaacgcctgatcaactttttcttt
gaaaagagcgatcgctatattaaagccaagcgcattgctgaaggagtcagtttagagcat
ttagaatcctcagcagtagagaaattaacggcgaaaatccaagctgcggctttatttccc
ctccatgccttgggagagcggctagtttatgctaaagtccgggaggcaacaggagggcga
atcaagcaagtcattagcggtggtggcgcacttcccaagcacatcgatatgttttttgaa
attattggtgtcgaaattttgcaaggctatggcttaaccgaaacatctcctgtaactaat
gtgcgtcgcccttggcataatgtccgtggttcatccggtcagacattacccgcaacagaa
actaaaattgtagatccagagactcgcaaacctttaccaataggtgagcgaggcttggtg
ttattgaaggggccgcaaattatgcaaggctattaccaaaatcccgaagcaacagcgaaa
gccatcgacgctgacggttggtttgatagcggcgatttgggttggttaacaccacaaaat
gacttagtactgactggtagggcaaaagatacgattgtcttaactaatggggaaaatatc
gagccgcaaccaatcgaagacgcgtgtttgcgatcgccctacatcgatcagattatgcta
gttggtcaagatcagcgtagccttggtgcattgattgtccccaatttggaagcattagta
aaatgggcagaaactcaaaatatcgatttgagtaaaccaaatgaagatgttaccgcctca
gccagtcaaaaaatagacctggagagtaaaataatccaggaattatttcggaaagaattg
aatcgggaagtgcaaaatcgtccaggctatagagcagatgaccgcatcggcccatttaag
ctcattccagagccgttttctattgaaaatggtttaatgacacaaacactaaaaatccgg
cgacatgtcgtcagcgaacgctatcgcgatattgtgaacgccatgtttgcttga
DBGET
integrated database retrieval system
