Microchaete diplosiphon: NIES3275_55860
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Entry
NIES3275_55860 CDS
T09944
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NIES3275_55860
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdp01007
]
NIES3275_55860
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdp03016
]
NIES3275_55860
Enzymes [BR:
mdp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
NIES3275_55860
Amino acid related enzymes [BR:
mdp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
NIES3275_55860
Transfer RNA biogenesis [BR:
mdp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NIES3275_55860
Prokaryotic type
NIES3275_55860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAY93547
LinkDB
All DBs
Position
complement(7141062..7143497)
Genome browser
AA seq
811 aa
AA seq
DB search
MRISLSWLRELVEIKLSPEELAETLTMAGFEVEDIEDRRTWANGVVVGRVLERQPHPNAD
KLSVCQVDIGAAETLNIVCGAANVRADIYVPVATIGTYLPNIDLKIKPAKLRGVPSQGMI
CSLKELGLPTDVDGIHIFSQENLTLGSDVRPLLGLEDVILDVTATANRADALSMVGIARE
VAALTGGKLSIPQPGEVSITQSGGNLAVSVSETQACPAYIGTVIEQVKIAPSPGWLQQRL
QAAGVRPINNVVDITNYVLLEWGQPLHAFDRERLKSVAGSDNVTIGVRFASAGESFKTLD
GQTRTLSAQNLLITANNKPVAIAGVMGGEETEVYEGTQSLVLEAALFDSVAIRRSSRGVG
LRSESSGRYERGVNRAELEVACRRALSLLTELAGGVITQQEIADTRPDPSTWTRSIALRL
DRVNQVLGPIDLGEETGELEEKDVERILTALGCELTPAGDRSWKVSVPPYRYRDLEREID
LIEEIARLYGYDNFCDTLPHKAEAGYLPLDQELIRKLRALFRAAGLTELIQYSLVKPGEN
RQIVLSNPLFVEYSALRSDLISGLIDAFQYNLEQGNGSLNGFEIGRIFSREEDGLQETEA
IAGIIGGDRTVSQWTSSGREQPMTWYEAKGILDSVFGQLGLQVEYQPDCRDPRLHPGRTA
SLWIRGNSLGIFGQLHPQLRREKGLPDSVYAFQLDADVLLDALDQDEILTPVFKSYSTYP
ASDRDIAFFAPVKVTVAEIEKAINKAGKELLESVELFDEYRGENVPRGQRSLAFRLIYRS
SDRTLTDAEVEPVHNKVREALVEKFGVNLRS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatctctttaagctggctgcgggaactagtagaaataaaacttagcccggaagaa
ttagccgaaaccctcacaatggctgggtttgaagtagaagatattgaagaccgccgcact
tgggccaatggcgttgttgtggggagagtgcttgagcgtcaaccccaccccaacgctgat
aaattaagtgtttgtcaagtagatattggcgcagctgagactttaaatattgtctgtggt
gctgcaaatgtccgggcagatatttatgtgccagttgctactataggtacttatttacca
aatatcgatttaaaaattaagcctgcgaaactgcgtggtgttccttctcagggaatgatc
tgttctttaaaagaactaggcttacccaccgatgttgatggtattcatattttttcccaa
gaaaatctcaccttgggtagcgatgtgcgtcctttgctgggtttagaagatgtaatttta
gatgtcaccgccacagctaaccgcgctgatgccttgagtatggtaggtatagctagggaa
gtcgcagctttaacaggtggtaaactcagcattccgcaaccaggggaagtttccattacc
caaagtgggggaaatttagctgtcagtgtttcggaaactcaagcttgtcctgcttatatt
ggcacagttattgaacaggtaaaaattgcgccttctcctgggtggttgcaacaacgccta
caggctgctggcgtgcgaccaatcaataatgttgtggatattaccaactatgtgttgttg
gaatggggacagccgttacatgcatttgatagagaacgcctgaaaagtgtagcgggaagc
gataatgtgacaattggtgtgcgcttcgccagtgcaggggaatcattcaaaaccttagat
ggacaaacccgcaccctctcagcccaaaacttattaatcaccgccaacaacaaaccagtg
gcgatcgcaggagtcatgggtggagaagaaacggaagtttatgaaggtacgcaaagcctg
gtattagaagccgccttatttgattccgtagcgattcgccgttcttctcgtggtgttggt
ttaagaagtgaatcttctggcagatacgaacgaggtgtgaaccgggccgaattagaagta
gcctgtcgtcgggctttatcgctgctaactgaattagctggtggcgtaattacccaacaa
gaaatcgctgatactcgccccgacccctcaacctggacgcgttccattgcactgcgctta
gaccgagttaatcaagtactagggccaattgacttaggcgaagagactggagaactcgag
gaaaaggacgttgagcggattttaactgcacttggttgtgaactcaccccagcaggcgat
cgctcttggaaagtttctgtaccaccctaccgttaccgcgacttagaacgggaaattgac
ttaattgaagaaattgcccggctttacggctatgacaacttttgtgataccttaccccac
aaagcagaagccggctatttgcctttagatcaagaactcatccgcaaattgcgcgcttta
ttccgcgccgccggactgacagaattaatccaatactctctagtcaaaccaggggaaaac
agacaaatcgtcctgtcaaaccccttatttgtcgaatattccgcattgcgaagcgattta
atctctgggttaattgatgccttccaatacaacctcgaacaaggaaacggttccctcaac
ggctttgaaattgggcggattttctcacgcgaagaagacggattacaagaaaccgaagcg
atcgcgggaattatagggggcgatcgcactgtcagccaatggacaagcagcggacgcgaa
caacccatgacttggtatgaagccaagggcattctcgacagcgtatttggccaacttggt
ttacaagtagaatatcaacctgattgccgcgatccacgcttacacccaggacgcacagct
tctctctggattagaggtaacagcttgggcatttttggtcaactccatccccaactgcgg
cgagaaaaagggttaccagattccgtctacgcatttcaactagatgcggatgtgctattg
gatgccctggatcaagacgaaattctcaccccagtatttaaatcctattccacctacccc
gccagcgatcgcgatatcgccttcttcgcacctgtgaaagttacagtcgccgaaatcgaa
aaagcgattaacaaagcaggtaaagaattactagaatccgtggaattattcgatgaatat
cgcggtgaaaacgtccccagaggacaacgtagtttagccttccgcctaatttaccgctcc
agcgatcgcaccctcaccgatgccgaagtcgaaccagtacacaacaaagtgcgcgaagct
ttggtagagaaatttggtgtgaatttgagaagttaa
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