Microchaete diplosiphon: NIES3275_59960
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Entry
NIES3275_59960 CDS
T09944
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIES3275_59960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_59960
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIES3275_59960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Vip3A_N
TssO
kleA_kleC
Peptidase_C98
Motif
Other DBs
NCBI-ProteinID:
BAY93952
LinkDB
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Position
complement(7621966..7624500)
Genome browser
AA seq
844 aa
AA seq
DB search
MRIGKQYWLFRGENCYDNFRLDIEALIQSETLELLEWNRLCQHLATFAATKLGAIAARHL
KIPDSQAESTQLLAQTKEVYQLESRISPSLSFEGIQDIGDSLERAELQGILGGDELLAIA
TTLSGSRNLRRIIDNQEDLPILTELVADLRTYPELEQEIHRCIDERGQVTDRASQKLGDI
RTELRKLRSQITQKLQNILQAKSGAVQEQLITQRGDRFVIPVKVTHKDAIPGIVHDTSTS
GATLYVEPHSIVPWGNQLRQTIRREQTEEEAIRRALTEQVAAVKPDLERLLAIVTTLDLA
TARSRYSFWLGANPPRFIDWADTESITLRQLRHPLLVWQHQHEQSPAVIPVDLLINPHIR
VVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFSQVLADIGDEQSLQQSL
STFSGHIRRISRILNAVGSEQGSGTGDWGLGDNEESSMPDAQCPMPNAQSLVLLDEVGAG
TDPAEGSALAIALLQYLADHSGLTVATTHFGELKALKYEDERFENASVEFDESTLSPTYR
LLWGIPGRSNALAIAQRLGLKLEVVEKAKTHLGGATDEVNQVIAGLEAQRRRQETKAAEA
QNLLQQAERLYKEVSTKAANLQEREKALKVSQEAAVQQAIAQAKGEIAQVIRRLQQGTPT
AQDAQQATNALNQIGQKFQPAAPAKPKVGFMPKVGDRVRISQFGQTAEVLVAPDEDGELT
VRFGIMKMTVKLEDIESLDGQKAEPIVKPKPAPAPVTPAAPPALAIRTSKNTIDIRGKRV
ADAELLLDNALAEATGPVWIIHGHGTGKLRQGVHNYLQQHPRVSKYEAAEQVDGGSGVTV
AYVG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcggaaaacagtattggctctttaggggcgagaattgttacgataatttcaga
ttagatattgaagccttgatccagtctgaaaccttagaactactagaatggaatcgcctc
tgccagcatcttgcgacatttgcggcaactaagttaggggcgatcgcagcacgtcatctg
aaaattcccgattctcaggcggaaagtacgcagttgttggcacaaacgaaagaagtttac
caactggagagtcgtatatcccccagtttatcctttgaggggattcaagatattggtgat
tccctggaacgggcagaactccaagggattttgggcggagatgaattgttagcgatcgca
actactctctctggcagcaggaacttacgccgaatcattgataaccaggaagatttaccc
atattgacagagctggttgccgatttacggacttatcctgaacttgaacaagaaattcac
cgttgtatcgatgaacgagggcaagtaaccgatcgcgccagccaaaagctgggagacatt
cgcacggaattgcggaaattgcggagtcaaatcacgcaaaaactgcaaaatatattacaa
gcgaagtctggagcagttcaagaacaactgattacccaaagaggcgatcgctttgtaatt
cctgtcaaagtgacacataaagacgctatccccggtattgttcatgacacctctactagt
ggtgccactttatatgtggaacctcatagcattgtgccttgggggaatcaattacgtcag
acgatcagacgagagcaaacagaagaagaagcgattagacgcgctttaacagagcaagta
gcagcagttaaaccagatttggagagattgctagcaattgttaccaccttggatttagca
actgcgcgatcgcgttacagtttttggctaggggcaaatcctcccagattcattgactgg
gcggacacagaaagcatcaccctgcgccaactgcgtcatcccctgttggtgtggcagcat
caacacgagcaaagcccagcagtaattcccgtagatttattgattaacccccatattagg
gtagtaactattactggccctaatacaggcggtaaaactgtcaccttaaaaaccctgggc
ttggcagcattaatggccaaagtcggcttatttgtaccagcccgcgagccagtagaaata
ccgtggtttagccaggtattagccgatattggcgatgaacaatcgctacagcaaagctta
tccactttttctggtcatatccgccgcattagccggattttaaatgcagtgggaagtgaa
cagggatcggggactggcgactggggactgggggacaacgaagaatcatcaatgcccgat
gcccaatgccccatgcccaatgcccaatccctagtgttactcgatgaagtaggcgcggga
accgatccagccgaaggtagtgctttagcgatcgcactcctgcaatatcttgcagatcat
tcggggctgacagtggcgacaactcactttggagaattgaaagcgctgaaatatgaagat
gagcgctttgaaaacgcttctgtagaatttgatgaaagtaccctatcaccaacttatcgg
ttgttgtggggaattcccggacgttccaatgctttggcaattgcccagcgcctagggtta
aaactagaagttgtcgaaaaagccaaaacccatctgggaggtgcaacagacgaagttaac
caagtaattgcggggttagaagcccaacgccgccgccaagaaaccaaagccgcagaagcc
caaaatttgttgcagcaagctgaacgtttatataaagaagtttccacaaaagcggcaaac
ttacaagagagggaaaaagctttaaaagtctcccaagaagcagccgtacaacaagcgatc
gcccaagctaaaggcgaaatcgcccaagtaataaggcgcttgcaacaagggacacccaca
gcacaagatgctcaacaagctaccaatgctttaaatcaaattgggcagaaatttcagcca
gccgcaccagccaaacccaaagtgggatttatgcccaaagtaggcgatcgcgtccggatt
tctcagtttgggcaaacagcagaggtgttagttgctcccgatgaagatggtgagttaact
gtgcgttttggcatcatgaaaatgacagtcaagctggaagacatagaatccttagatggt
caaaaagctgaacccatcgtcaaaccaaaaccagcaccagcaccagttaccccagctgcg
ccaccagccctagcaattaggacttccaaaaatacaattgatatccgaggtaagcgtgta
gctgatgcggaattgcttttagataatgcacttgctgaagctacagggccagtatggatc
attcacggacatggtacaggtaaacttcgccaaggtgtacataactatttgcagcaacac
cccagagtcagcaaatacgaagctgcagaacaagtagatggtggtagcggtgtcaccgtg
gcttacgtggggtga
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