Microchaete diplosiphon: NIES3275_65980
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Entry
NIES3275_65980 CDS
T09944
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES3275_65980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_65980
Enzymes [BR:
mdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NIES3275_65980
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES3275_65980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAY94546
LinkDB
All DBs
Position
complement(8356864..8357544)
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AA seq
226 aa
AA seq
DB search
MTLKETISPTPQIESLTPETFTHALRVLAHLDSDFASILEKFGPPPMWERERGFPTLLRI
ILEQQVSLAAARAVYVRLCEAIQPLTPENFLTLDDMQLRGVGFSRQKMLYCRELAQAITH
GQLNLVQLETMDETTIRTELKRIKGIGDWTVDIYLLMALQRPDVFPKGDLGIAIALQKLK
GLTTRPTPTQIEAIAQNWRPWRAVATRILWHYYLSALTANSKLKNF
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgactttaaaagaaacgatttctccaacaccacaaatagaatcactaactccagaaact
tttacccatgctttgagggtgcttgctcatcttgacagtgattttgctagcattctcgaa
aaatttgggccgccaccaatgtgggaaagagaaaggggttttcctactttgctgcggatt
attctagaacagcaagtttccttagcagcagccagggcggtttatgtacgcctatgtgaa
gcgatccaaccactcacaccagagaattttttaacgcttgacgatatgcaattaagagga
gttgggtttagtcggcaaaaaatgctctattgtcgagaattggcgcaggcaattactcat
ggtcaactgaatttagttcaactagagacaatggatgaaacgactattagaactgaatta
aagcgtatcaaagggattggcgactggacagttgatatttacttgctgatggcgctacaa
cgtcctgatgtgtttcccaaaggtgatttaggaatagcgatcgctttacaaaagctcaaa
ggattaacaacacgccccacacccacacaaatagaagcgatcgcccaaaattggcggcct
tggcgtgcagttgctaccagaatcctctggcactattatctcagtgccctaacagcaaat
tccaaattaaaaaacttttaa
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