Mycolicibacterium doricum: MDOR_05090
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Entry
MDOR_05090 CDS
T06662
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mdr
Mycolicibacterium doricum
Pathway
mdr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MDOR_05090 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdr03400
]
MDOR_05090 (recB)
Enzymes [BR:
mdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MDOR_05090 (recB)
DNA repair and recombination proteins [BR:
mdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MDOR_05090 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BBZ06340
UniProt:
A0A7I7VMN9
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All DBs
Position
complement(495968..499396)
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AA seq
1142 aa
AA seq
DB search
MRGQMRDPLRSSLDFDLLGPLPAPRTTTVLEASAGTGKTFALAGLVTRYVAEGVATLDQM
LLVTFGRAASQELRERVRGQMRDALVAFDDPSTVGDNELVAHLIDAPDEERHLRRLRLRD
ALAGFDAATIATTHQFCQLVLKSLGVAGDTDTGGQLVESLDELTAEIVDDLYLAHFGQQR
DDPVLTRGQALALAGEVIRNPGAELRPRKPPPETVAAVRVEFAEAVCAELERRKRRSGVL
HYDDLLSRLANALADADSPARTRMHRRWSIVMVDEFQDTDPVQWQVMDRAFTGRSTLILI
GDPKQAIYAFRGGDIVTYLHAASTAGHRQTLGTNWRSDGGLVDRLQAVLRDAELGDPEIV
VRPVEARHQGRRLQGAPHNDPFRLRIVSRDTFGTRADKAIPMDKLRPHISADLAADIGHL
LASGATFCDQPIEAKDVAVIVETHKDARACFDALSVAGIPAVYTGDSDVFNSPAGDDWLC
LLEAFDQPHRSGLVRAAATTMFFGRTAEELAAQGDPLTDEIAERLRAWADHARERGVAAI
FEAANMTGMGRRVLSWRDGARHMTDLAHLTQVLHDVAHREHFGLPALRDWLRTQREERSG
AVERNRRLDNDAAAVQIMTVWVSKGLQYPVVYLPFAFNRNIQTRDCVLFHDGRTRCLHIG
GDDSPDHAQVERLGRSEAASDDVRLTYVALTRAQSQVVAWWAPSWDEPNGGLSRLLRGRR
PGDTTVPDRCDPPRIDDGDARTALRAWADLGGPALEDSQIAGPAAPHPHVQPTGLQVRHF
HRGIDTAWRRTSYSGLLRAAEETGGSGVTSEPEVVELDDETAGVPIWKPDDEAAAVSSPM
AELPTGAKFGSLVHAVLEHADPFATDLRAELERRVREHRVWWPVDVAPEVLAEALLPMHD
TPLGALAPNVTLRQIGLRDRLCELEFELPLARGDVRAGAPAITLADVGRLLGRHLQADDV
LAPYGARLTDRALGGQSLKGYLTGSIDAVLRVDGRYLVVDYKTNWLGQPDSPLTAAHYGR
ARMAEAMLHSDYPLQALLYCVVVHRFLRWRVPGYDPEEHLGGVLYLFVRGMCGASTPQVD
GDPAGVFSWRPPAPLVVALSDLLDAGSAAASKNAASKNTDGLVRIGLRVAATGGTPRRVN
EG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccagatgcgcgatccgctccgctcctcgctggatttcgacctgctcggcccg
cttcccgcaccacgcaccacgacggtgctcgaggccagcgcgggcaccgggaagacgttc
gcgctcgccgggctggtgacgcgctacgtcgccgagggcgtcgcgacgctcgaccagatg
ctgctggtgacgttcggccgggcggccagccaggaactgcgggagcgggtgcgcggccag
atgcgcgacgcgctggtggccttcgacgatccgtcgaccgtcggggacaacgaactcgtc
gcccacctcatcgacgcccctgacgaggaacggcacctccgcaggctacggctgcgggac
gcgttggccggtttcgacgccgccacgatcgcgaccacccaccagttctgtcagctggtc
ctgaaatcacttggggtggctggtgatacggataccggcgggcagctggtggagagtctc
gacgagctgaccgccgagatcgtcgacgacctgtacctcgcccacttcggccagcagcgc
gacgatccggtcctgacccgcgggcaggcgttggcactcgccggtgaagtcatccgcaac
cccggcgccgagctgcgaccgcgcaaaccgccaccagaaacggtggccgcggtgcgcgtc
gagttcgcggaagccgtgtgtgccgaactcgagagacgcaaacgccgctcgggcgtcctg
cattacgacgatctgctgtccaggttggccaacgcgctcgccgacgcggactccccggcc
cgcacccgcatgcaccgccgctggtcgatcgtcatggtcgacgagttccaggacaccgat
ccggtgcagtggcaggtgatggaccgggcgttcaccggccgctcgacgctgatcctgatc
ggcgaccccaaacaggcgatctacgcgttccgtggcggcgacatcgtcacgtatctgcac
gcggcgagcacggccgggcaccgccagaccctgggcaccaactggcgcagtgacggcggc
ctcgtcgaccggctgcaggccgtgctgcgcgacgccgaactcggcgaccccgagatcgtc
gtacggcccgtcgaggcccggcaccaggggcgtcgactccagggtgcgccgcacaacgat
cccttccgtctgcgcatcgtctcgcgtgacaccttcggcacccgtgccgacaaggcgatc
ccgatggacaagctgcgaccacacatcagcgcggacctggccgccgacatcggccacctg
ctcgccagcggagcgacgttctgcgaccagccgatcgaggccaaggacgtcgcggtgatc
gtcgagacccacaaggacgcccgcgcctgcttcgacgcgctgtcggtggccggcatcccg
gccgtctacaccggggactccgacgtattcaactcccccgccggtgacgactggctgtgc
ctgctggaggcgttcgaccagccgcaccgctccgggctggtgcgcgccgcggccaccacg
atgttcttcggccgcaccgccgaagaactcgccgcacagggcgacccgttgaccgacgag
atcgccgaacggctgcgcgcgtgggccgaccacgcccgtgagcgtggtgtcgccgcgatc
ttcgaagcggcgaacatgaccgggatgggacggcgggtgctgtcctggcgcgacggtgcg
cggcacatgaccgacctcgcccacctgacgcaggtgctgcacgacgtcgcgcaccgcgaa
cacttcggcctgcctgcgctgcgggactggctgcgcacgcagcgcgaggagcgcagcggt
gccgtggaacgcaaccgccgcctcgacaacgatgccgcggccgtgcagatcatgaccgtg
tgggtcagcaagggcctgcagtacccggtggtgtacctgccgttcgcgttcaaccgcaac
atccagacgcgcgactgcgtgctgttccacgacggccgcacccgctgtctgcacatcggc
ggcgacgacagccccgaccacgcacaggtggaacgtctcggccgcagcgaggccgcaagc
gacgacgtgcgtctgacctacgtcgcgctgacgcgggcgcagtcccaggtggtcgcgtgg
tgggcgccgtcgtgggacgaacccaacggcgggctgtcgcggctgctgcgggggcgcagg
cccggcgacacgaccgtgccggaccgctgcgatccgccgagaatcgacgacggggacgcc
aggacggcgctgcgcgcgtgggccgatctcggcgggccggcgctcgaggactcccagatc
gccggacccgcagcaccccatccgcacgtgcagccgacggggctccaggttcggcacttc
caccgtggcatcgacaccgcgtggcggcgcacgtcgtactcggggctactgcgggccgcc
gaagagaccgggggcagcggtgtgaccagtgaacccgaggtggtcgaactcgacgacgaa
accgccggggtgccgatctggaagcccgacgacgaggccgccgcggtgtcctcgccgatg
gcggagctgccgacgggcgcgaagttcgggtcactggtgcatgcggtgctcgagcacgcc
gacccgttcgccaccgatctccgcgccgaactggagcgcagggtccgtgaacacagggtg
tggtggccggtcgacgtcgctcccgaggtgctggccgaggcgctgctgccgatgcacgac
accccgctcggcgcgctcgcaccgaacgtgacgcttcggcagatcggattgcgggaccgc
ctgtgcgagttggagttcgagttgccgctggcccgcggggacgtgcgcgcgggtgcgccg
gcgatcacgctggccgacgtgggccgcctgctcgggaggcaccttcaggccgacgacgtg
ctggccccgtacggtgcccggctcaccgaccgcgccctgggcggccagtcgctcaagggg
tacctgaccgggtcgatcgacgcggtgctgcgggtggacggccgctatctggtggtcgac
tacaagacgaactggctcggccaaccggattcaccgctcaccgccgcccattacggccgc
gcccgcatggccgaggcgatgttgcactcggactatccgctgcaggcgctgctgtactgc
gttgtggtgcatcgtttcctgcgctggcgagtgccggggtacgacccggaagaacatctc
ggcggcgtgctgtacctgttcgtgcgcggaatgtgcggggcgtcgacgccgcaggtcgac
ggtgatccggccggtgtgttcagttggcggccccccgctcctctcgtcgtcgcgctgtcg
gacctgctcgacgccggttcggcggccgcatcaaagaacgccgcatcaaagaacactgac
ggtttggtgagaatcggcctgcgggttgcggcaaccgggggtacgccacgtagggtgaac
gaaggttga
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