Mycolicibacterium doricum: MDOR_08780
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Entry
MDOR_08780 CDS
T06662
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mdr
Mycolicibacterium doricum
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdr03021
]
MDOR_08780
Transcription machinery [BR:
mdr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MDOR_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_3
MarR_2
HTH_24
HTH_Crp_2
MarR
HTH_31
Sigma70_ECF
HTH_19
HTH_37
HTH_20
HTH_Tnp_4
DUF7343
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
BBZ06709
UniProt:
A0A7I7VN44
LinkDB
All DBs
Position
870517..871251
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AA seq
244 aa
AA seq
DB search
MAAMFRELQGITPDSPQFHRQRDRIVERCLPLADHIARRFDGRGEPRDDLVQVARVGLVN
AVIRFNVDAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGSATAELSQRL
GRAPTASELAEELGMDRDEVVEGLVAGSSYNTLSIDSGGNSGNEDAPAIADTLGDVDLGL
DQIENREALRPLLAALPERERMVLLLRFFENLTQTQIAERVGISQMHVSRLLAKSLTRLR
DQLQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcgatgttccgggaactgcaggggatcaccccggactcaccccagttccaccgt
cagcgcgaccggatcgtcgaacgctgtctgccgctggccgatcacatcgcccgtcgcttc
gacggccgcggggaaccgcgcgacgacctcgtccaggtggcccgggtcggtctcgtcaac
gcggtgatccgcttcaacgtcgacgccggatcggatttcgtctctttcgcggtgcccacc
atcatgggagaggttcggcggcacttccgggacaacagctggtcggtcaaggtgccacgc
cggctcaaggagctgcacctgcggttgggttcggccacggccgagctgtcccaacggctg
ggtcgcgcgccgacagccagcgagctcgccgaggaactgggcatggaccgcgacgaagtg
gtcgagggcctggtcgccggcagctcctacaacaccctgtcgatcgacagcgggggcaac
agcgggaacgaggacgcccccgcgatcgccgacaccctcggcgatgtggatctcggactc
gatcagatcgaaaaccgcgaggcgctgcgacctctgctggcggcgcttcccgagcgcgag
cgcatggtgctgctgctgcggttcttcgagaacctcacccagacccagatcgccgaacgc
gtcggcatctcgcagatgcacgtgtccaggctgctcgccaagtcgctaacccggctccgc
gaccagttgcagtag
DBGET
integrated database retrieval system
