Mycolicibacterium doricum: MDOR_09680
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Entry
MDOR_09680 CDS
T06662
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mdr
Mycolicibacterium doricum
Pathway
mdr03420
Nucleotide excision repair
mdr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MDOR_09680
03430 Mismatch repair
MDOR_09680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdr03400
]
MDOR_09680
Enzymes [BR:
mdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MDOR_09680
DNA repair and recombination proteins [BR:
mdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MDOR_09680
MMR (mismatch excision repair)
Other MMR factors
MDOR_09680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBZ06799
UniProt:
A0A1X1TC74
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All DBs
Position
958418..961693
Genome browser
AA seq
1091 aa
AA seq
DB search
MTPRYSPAELASELGLFAPTDEQSAVIAAPPGPVVVIAGAGAGKTETMAARVVWLVANGY
ATPGQVLGLTFTRKAAGQLLRRVRTRLARLSGAGLVPGAGPGLDTADDPPTVSTYHAFAG
TLLREHGLLLPIEPETRLLGETELWQLAHRVVCDHPGPLDIDKTPAAVTDMVLRLAGQLA
EHLVDTDELRDTHVELDRLVHTLPAGPYQRDRGPSQWLLRMLTTQTERTQLIPLIDALHR
RMQFEKVMDFGTQMAAAAKLAAGFPQVGAELRSRYRVVLLDEYQDTGHAQRVALSALFGG
GVDDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGSPARVLELRTSWRNPPSTL
HLANAVSAQARQRSVAVRSLRPRPGAETGTIRLALLKDVAAEREWVADEVARRHHAGRAE
SGVPPTAAVLLRRNADAAPMAEALTARGVPVEVVGLAGLLGVAEVADVVAMLRLVADPAA
GAAATRTVTGPRWRLGGRDIAALWRRAVELDDVGPGPEATAAEIVAQAAPDADAACLADA
ICDPGAADRYSPEGYRRIVALGRELAWLRAHLGMALPDLVAEVRRVLGVDVEARAGMPVA
AGWSGTEQLDAFVDVVADYAGRPGATIGGLLAYFDAATERENGLAPADLAVSTERVQILT
VHAAKGLEWQVVAVPHLSGRVFPSTAQARTWLTDPADLPPLLRGDRATTTDHGVPVLDTS
DVNDRKSLSDRINDHKRRLEQRRIDEERRLLYVALTRAEDTLLLSGHHWGGTEGKPRGPS
EFLEELKDIIDRAEQDGQPCGVVEQWAPAPADGEKNPLRDHLKEVLWPADPAGDRRADVD
RGAQLVAEAMAGAQVTVQDVDGWAADVDVLLAERERAAQKPPLTLPAEVSVSTLVKFSDD
PDAVLFRLNRRLPVRPDPNASLGTDFHDWVQRYFGAERLFDLDDLPGAVDSDTRRTEAEQ
LAELQTAFMLSPWAARTPVDVEVPFDMVIGETVVRGRIDAVFADDDGGATVVDWKTGALP
DAPAAAQHTAIQLAVYRLGWAQLSGCPVERVRAAFHYVRPNQTVRPTGLPNIEGLASLLQ
AARESARQEVR
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcggtacagccccgccgaattggcttcggagctaggccttttcgcgcccacc
gacgaacaatccgcggtcatcgccgcgccgccgggaccggtcgtcgtgatcgccggcgcg
ggtgcgggcaagaccgagaccatggcagctcgggtggtgtggctggtcgccaacggctac
gcgacacccggccaggtgctcgggctgaccttcacccgcaaggccgctggtcagttgctg
cgccgagttcgcacccggttggcgcggctgtccggtgcggggctggtgcccggtgcaggg
cctgggctcgacaccgccgacgacccgccgaccgtcagtacctatcacgcgttcgcaggc
acgctgctgcgtgaacacggtctgctgctgccgatcgagccggagacgcggctactgggg
gagacggaactgtggcagctagcccaccgcgtagtttgtgaccatcccggcccactggac
atcgacaagacccccgcggcggtcaccgacatggtgctgcgcctcgccggtcagctcgcc
gagcatctggtcgacaccgatgagctccgcgacactcacgtcgagctcgatcggctggtg
cacacgctgcccgccgggccgtatcagcgcgaccgggggccgagccaatggctgctgcgg
atgctgacaacccagaccgagcgcacccagctcatcccgctgatcgacgcgctgcaccgg
cgaatgcagttcgagaaggtgatggacttcgggacgcagatggccgccgcggcgaagctc
gccgccggatttcctcaggtcggcgccgagctgcggtcgcggtaccgcgtggtgctgctc
gacgagtaccaggacaccgggcacgcgcagcgggtggcgttgtcggcgttgttcggtggc
ggtgtggacgacggcctggcgttgaccgcggtcggcgacccgattcagtcgatctacggg
tggcgcggcgcgtcggcgacgaacctgccccgtttcgccaccgacttcccgctctccgac
ggcagccctgcgcgcgtcctcgagctccgcaccagctggcgcaatccgcccagcacattg
catctggccaacgcggtgtccgcgcaagcgcggcagcgctccgtcgcggtgcggtcgctg
cggccacgcccgggcgccgaaaccggcaccatccggctggcgttgctcaaagacgtcgcc
gcagagcgtgagtgggtggccgacgaggtggcgcgtcgtcaccacgccggccgcgcagag
agcggggttccgcccacggcggcggtgctgctacgccgcaacgccgatgcggcaccgatg
gccgaggcgctcaccgcacgtggtgtgcccgtcgaggtggtggggttggccggtttgctc
ggggtcgccgaagtcgccgacgtggtggcgatgttgcgtctggtggccgatcccgccgcg
ggtgcggcggcgacgcgtacggtaaccggtccgcggtggcgcctcggtgggcgcgacatc
gcggcgctgtggcggcgggccgtcgaactcgacgacgtcgggcccggtccggaggcgacg
gcggccgagatcgtggcgcaggccgcgcccgacgccgacgcggcctgcttggccgacgcg
atctgtgatcccggtgccgccgatcggtactcgccggaggggtatcgccgcatcgtcgcg
ctcggtcgcgaattggcctggctgcgcgcccatctcgggatggcgctgcccgacctcgtc
gcggaggtgcgtcgggtgctcggtgtcgacgtcgaggcccgcgccggtatgccggtggcg
gcgggctggtcaggaaccgagcaactcgacgccttcgtcgacgtcgtcgccgactacgca
ggccggcccggcgccacgatcggtgggctgctcgcctacttcgatgcggcgacggagcgg
gagaacggcttggcgcccgcggatctcgccgtctccacggagcgggtgcagattctgacg
gtgcacgcggccaaggggctggaatggcaggtcgtggcggtgccgcatctgagcggacgg
gtctttccctcgaccgcgcaggcccgcacgtggttgaccgatccggcagacctgcctccg
ctgctgcgcggtgaccgggcgaccaccaccgaccatggcgtaccggtgctcgacacgtcg
gacgtgaacgaccgaaagagtctgtctgacaggatcaacgaccacaagcgccgcctcgag
cagcgccgcatcgacgaagagcgccgactgttgtacgtcgcgctcacccgcgccgaggac
acgctgctgctctccgggcaccactggggtgggacggagggcaagccgcggggcccgtcg
gagttcctggaggagctcaaggacatcatcgaccgcgccgagcaggacggccaaccgtgt
ggagtggtcgagcagtgggcgccggcacccgctgacggcgagaagaacccgttgcgcgac
cacctcaaagaggtgctctggcccgccgacccggccggcgatcgacgcgccgacgtcgat
cgcggcgcgcaattggtcgccgaggcgatggccggcgcgcaggtgacggtgcaggacgtc
gacggctgggcggccgacgtcgacgtgctgctcgccgagcgtgaacgagcagcgcagaag
ccaccgctgacgctgcctgccgaggtatcggtgagcacgctggtgaaattcagcgacgat
cccgatgcggtgctgttccgcctcaaccgacggttgcccgtccgccccgaccctaatgcg
tcgctggggaccgacttccatgactgggtgcagcgctatttcggcgccgagcggttgttc
gacctcgacgatctacccggagcggtcgacagcgacaccagacgcaccgaggccgaacaa
ctcgctgaactgcagacggcgttcatgttgtcgccgtgggcggcccgcacgccggtcgac
gtcgaggtgccgttcgacatggtcatcggcgagacggtggtgcgggggcgtatcgacgcg
gtgttcgccgacgatgacggcggcgccaccgtcgtcgactggaagaccggagccctcccg
gacgcgcctgcggccgcccagcacaccgcgatccagctcgccgtctaccggctggggtgg
gcacagctcagcgggtgcccggtggagcgggtgcgggcggcgttccactacgtgcgcccg
aaccagacggtgcgcccgacgggcctaccgaatatcgagggtctcgcgtcgctgctgcag
gcggcacgggaatcggcgcgtcaggaggtgcggtag
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