Mycolicibacterium doricum: MDOR_15430
Help
Entry
MDOR_15430 CDS
T06662
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mdr
Mycolicibacterium doricum
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MDOR_15430 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdr03021
]
MDOR_15430 (rpoD)
Transcription machinery [BR:
mdr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MDOR_15430 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBZ07374
UniProt:
A0A1X1T867
LinkDB
All DBs
Position
complement(1525403..1526887)
Genome browser
AA seq
494 aa
AA seq
DB search
MAATKASPATDEPVKRTATKTPAKKKTAAAKAPAANAANGTAPAKRAAKGTATKTRGPAK
NDGAAPHGRGKKSTAPEAGTADALVDEDLDSADTLDAEPDIDVEDADLDLEDLDTGDDTD
SGDDSDSGDTDAAEVKAVPKGGAVPAAPATEDDEIAEPSEKDKASGDFVWDEEESEALRQ
ARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLFATQKLAELAERGEKLP
VQQRRDMQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEK
FDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREP
TPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFT
LLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKL
RHPSRSQVLRDYLD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacaaaggcaagcccggcaaccgatgagccggtgaagcgcaccgccaccaag
acccccgcgaagaagaagaccgccgcggcgaaggccccggcggccaacgctgcgaacggc
accgcgccggccaaacgggcggccaagggcacggcgaccaagacccgcggcccggcgaag
aacgacggcgccgccccacatggtcgcggcaagaagtccactgcgcccgaggccggcacc
gccgacgccctggtcgacgaggacctcgacagcgccgacaccctcgacgccgaaccggac
atcgacgtcgaggacgccgacctcgacctcgaggacctcgacaccggcgacgacaccgac
agcggcgacgactccgacagcggcgacaccgacgccgccgaggtcaaggccgtcccgaag
ggcggtgcagtgcccgccgcacccgccaccgaggatgacgagattgccgagccgtccgag
aaggacaaggcctccggcgacttcgtctgggacgaggaggagtccgaggcgctgcgccag
gcccgcaaggacgccgagctcaccgcctcggccgactcggtgcgcgcctatctcaagcag
atcggcaaggtggcgctgctcaacgccgaggaagaggtcgagctcgccaagcggatcgag
gccggcctgttcgcgactcagaaactggccgaactcgccgagaggggcgagaagctgccg
gtgcagcagcgccgcgacatgcagtggatctgccgcgacggcgaccgcgccaagaaccac
ctgctcgaggcgaacctgcgcctggtggtgtcgctggccaagcgctacaccggccgcggg
atggccttcctggatttgatccaggagggcaacctcggcctgatccgcgcggtcgagaag
ttcgactacaccaagggctacaagttctcgacctacgccacgtggtggattcgtcaggcc
atcacgcgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatggtggaa
gtcatcaacaagctgggccgcatccagcgagagctgctccaggacctgggtcgcgaaccc
acgcccgaagagctcgccaaggagatggacatcacgccggagaaggtgctggagatccag
cagtacgcgcgtgagccgatctctctggaccagacgatcggcgacgagggcgacagccag
ctcggcgacttcatcgaggactccgaggccgtcgtcgccgtcgacgccgtttcgttcacg
ctgttgcaggaccagctgcagtcggtactggagacgctgtcggagcgcgaggccggcgtg
gtgcggttgcggttcggcctcaccgacggccagccacgcaccctcgacgagatcggccag
gtctacggcgtcacgcgcgaacggatccgccagatcgagtcgaagacgatgagcaagctc
cggcatcccagccggtcccaggtgctgcgcgactacctggactga
DBGET
integrated database retrieval system
