Mycolicibacterium doricum: MDOR_15610
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Entry
MDOR_15610 CDS
T06662
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mdr
Mycolicibacterium doricum
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdr03016
]
MDOR_15610
Enzymes [BR:
mdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MDOR_15610
Transfer RNA biogenesis [BR:
mdr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MDOR_15610
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Neopullulanase-like_C
Motif
Other DBs
NCBI-ProteinID:
BBZ07392
UniProt:
A0A1X1T7N0
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All DBs
Position
complement(1543732..1545009)
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AA seq
425 aa
AA seq
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MSETPNPDLEGPDPQDASTAAAAIPLLAPADGVPGLAVTTDEILAAAELLAGGHGPFAID
AERASGFRYSNRAYLVQIRREGAGTVLIDPVNHGEDPTMVMAPVADVLDSGEWVLHAADQ
DLPCLAELGMRPPKLYDTELAGRLAGFARVNLATMVSDLLGLQLMKGHGAADWSKRPLPD
EWLNYAALDVEVLLELRDAVAAVLDDQGKTDWAMQEFEHLRTYEAAPTRRDRWRRTSGIH
KVRSPQALAAVRELWTTRDHIARRRDIAPGRILPDTAIINAATADPDSVEKLTALPVFGG
ARQRRSAQVWLDALDRARHTTDLPDSAEPMNGPPPPSRWARRKPEAAARLEAARAGLSAL
SERVSVPSENLVTPDVVRRLCWDWKPVTDIAAAVEEFLVAAAVRPWQRDLVVPVLTAALA
ANAAE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgccgaacccggacctcgagggtcccgatccgcaagacgcaagcacagct
gcggcggccatcccgctgctcgctccggccgacggggtgcccggccttgcggtgacaact
gacgagattctcgccgcggccgaactgctcgccgggggtcacggcccgttcgccatcgac
gccgagcgtgcgtcggggttccggtactccaaccgcgcctatctcgtgcagatccggcgc
gaaggcgcgggcacggtgctgatcgatccggtcaaccacggcgaggacccgaccatggtg
atggccccggtggccgatgtcctcgacagcggcgaatgggtgctgcacgccgccgaccag
gatctgccgtgcctggccgaacttggcatgcggccgccgaagctctacgacaccgaactc
gccggacgactggccggctttgcccgggtgaacctggcgacgatggtctccgacctgctc
gggctgcagctgatgaagggccacggcgccgccgactggtccaagcgcccgctccccgac
gagtggctcaactatgccgcgctggacgtcgaagtgctgctcgaactccgtgacgcggtc
gccgcggtactggacgaccaaggcaagaccgactgggccatgcaggaattcgaacatctg
cgaacctacgaagcggcgccgacccgccgcgaccggtggcgccggacctccggtatccac
aaggtgcgcagcccccaggcgctggcagcggtgcgcgagttgtggaccacgcgcgaccac
atcgcccgcagacgcgacatagcgccggggcgcatcctgcccgacaccgcgatcatcaac
gctgccaccgccgatcccgacagcgtcgagaagctcaccgcgctaccggtgttcggcggc
gcccggcaacgccgcagcgcgcaggtatggctcgacgcgctcgaccgggcgcgccacacc
acggatctgcccgactcggccgagccgatgaacggtccgcccccgccatcacggtgggcg
cgccgcaaacccgaggcggcggcgcgcctggaagccgcccgcgctggtctctccgcgttg
tcggagcgggtttccgtgccgtcggagaacctcgtcaccccggatgtggtacgccggctg
tgctgggactggaagccggtcaccgacatcgccgccgcggtcgaggagttcctggtggcg
gccgcggtgcgcccgtggcaacgcgacctggtggtgccggtgctgactgcggcgctcgcc
gccaacgccgccgagtga
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