KEGG   Mycolicibacterium doricum: MDOR_21150
Entry
MDOR_21150        CDS       T06662                                 
Name
(GenBank) alternative sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mdr  Mycolicibacterium doricum
Brite
KEGG Orthology (KO) [BR:mdr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdr03021]
    MDOR_21150
Transcription machinery [BR:mdr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MDOR_21150
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_23 HTH_3 Sigma70_ECF HTH_24 MarR MarR_2 KORA DUF7343 HTH_AsnC-type HTH_IclR HTH_Tnp_ISL3 DUF134 HTH_7 HTH_31 LacI
Other DBs
NCBI-ProteinID: BBZ07946
UniProt: A0A7I7VRN1
LinkDB
Position
complement(2109069..2109878)
AA seq 269 aa
MTIIDDTPQMTARRSSTRTQDDYADVPDMFRLLAALTAGTAEHDRQRERIVTRCLPLADH
IAYRYHRKGENLDDLVQIARVGLMHAVNRFDPENGANFLSFAVPTMLGEIRRHFRDNGWA
MHVPRRLKDLHVQITRATPRLTQSLGRAPSATDLAAELGAARQEVVECLVAGDAYSLRSI
DSPISSADDATRSLADTLGEVDTDMEHITDRESLRPLLAALSERERTVITLRFFASMTQT
QIAERIGVSQMQVSRILAKTLEQLRDAMS
NT seq 810 nt   +upstreamnt  +downstreamnt
atgacgatcattgacgacacaccacagatgacggcccgcaggtcgtccacccgtacgcag
gacgactacgcagacgtgcctgacatgtttcggctgcttgcggcgttgacagccggcacc
gccgagcacgaccggcagcgcgaacgcatcgtgacgcgatgcctcccgctggccgaccac
atcgcataccgctaccaccgcaagggcgagaaccttgacgacctcgtacagatcgcccgt
gtaggcctgatgcacgcggttaaccgcttcgacccggagaacggcgccaacttcctgtcg
ttcgcggtaccgacgatgctcggtgagatccggcgtcacttccgcgacaacggttgggct
atgcatgtgccgcgcaggctcaaggatctgcacgttcagatcaccagggcgaccccgcgg
ttgacgcagtcactcggccgcgcgcccagtgccaccgatctggccgccgagctcggggcc
gcccggcaagaggtggttgagtgcctggttgccggcgatgcttacagcctgcgctcgatc
gatagcccgatttcgtcggctgacgacgccacacgttcgctcgccgacacccttggcgag
gtggacaccgatatggaacacatcaccgaccgcgaatcactacgcccgctgctggcggcc
ctgagcgaacgcgagcgcaccgtgatcaccctgaggttcttcgcctcgatgacacagacg
cagatcgccgagcgcatcggcgtatcccagatgcaggtttctcggatcctggcgaagact
ctcgagcagttgcgggacgcgatgagctga

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