Mycolicibacterium doricum: MDOR_27460
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Entry
MDOR_27460 CDS
T06662
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mdr
Mycolicibacterium doricum
Pathway
mdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MDOR_27460 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdr03021
]
MDOR_27460 (rho)
03019 Messenger RNA biogenesis [BR:
mdr03019
]
MDOR_27460 (rho)
Transcription machinery [BR:
mdr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MDOR_27460 (rho)
Messenger RNA biogenesis [BR:
mdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MDOR_27460 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BBZ08577
UniProt:
A0A1X1TIE9
LinkDB
All DBs
Position
complement(2787595..2789565)
Genome browser
AA seq
656 aa
AA seq
DB search
MTDTDLFTADSAERTELPNIVNTETSTASASPAVTTTTAETAPTADVASGDRATSLTSMV
LPELRALARQIGVEGASGMRKSELIAAIRERRGEGNGSKGDNTATAAAAEQTPPRRERRG
ASRQAGAAEASATEQPTAEQPAAEQVVAEQKTERPKNGRTRAEQPAEQSDGEQPKAAQRR
SDRPRGDQSDTRSEDRSDTDQHQGQGNRNNGNSSNSSNSSNSSNSGNNADGDDDGDGRGG
RRGRRFRDRRRRGERGSESGGGGDRDTEIREDDVVQPVAGILDVLDNYAFVRTSGYLPGP
NDVYVSMNMVRKNGLRRGDAVTGAVRVPKEGEGGGQNSRQKFNPLVRLDSVNGGPVEDAR
KRPEFGKLTPLYPNQRLRLETSPDKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDI
ANAITRNNPECHLMVVLVDERPEEVTDMTRSVKGEVIASTFDRPPSDHTTVAELAIERAK
RLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGG
SLTIVATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELL
LGPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKTNYEFLVQVSKTAPGLADHD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcttcacggccgacagcgctgagcgaacagagttgccgaacatc
gtgaacactgaaacttctacagcgtcggcgagcccggccgtcaccacgacgaccgcggag
accgcccctaccgccgacgtcgcttcgggtgaccgcgccacgtcgctgacctcgatggtt
ctgccggaactgcgcgccctggcgcggcagatcggcgtcgaaggtgcctcgggcatgcgc
aagagcgaactgatcgccgcaattcgcgagcgccgcggcgaaggtaacggttcgaagggc
gacaacaccgccaccgccgccgcagccgagcagacgccgccgcgccgcgagcgtcgtggc
gcgtcccgccaggccggcgccgccgaagccagcgccaccgagcagcccactgccgagcag
cccgccgccgagcaggtcgtcgcggagcagaagaccgaacgccccaagaacggccggacc
agggccgagcagcccgcggagcagtccgacggcgagcagcccaaggctgcgcagcgccgg
tcggatcgcccgaggggcgatcagtccgacaccaggtccgaagaccggtccgacaccgac
cagcatcagggccagggcaaccggaacaacggcaacagcagcaacagcagcaacagcagc
aacagcagcaacagcggcaacaacgccgacggggacgacgacggcgacggccgcggcggc
cggcgcggacgccggttccgcgaccgcaggcgtcgcggcgaacgtggcagcgagagcggc
ggcggtggcgatcgcgacaccgagatccgcgaggacgacgtcgtccagcccgtcgcgggc
atcctcgacgtcctcgacaactacgcgttcgtccgcacgtcgggctatctacccgggccg
aacgacgtctacgtgtcgatgaacatggtgcgcaagaacggattgcgccgcggcgatgcc
gtgaccggtgcagtcagggtgcccaaggaaggcgaaggcggcggccagaattcgcgtcag
aagttcaatccgctggtgcgcctcgacagcgtcaacggcgggccggtcgaagacgccagg
aagcgtccggaatttggcaagctgaccccgctgtaccccaaccagcggctgcgcctggaa
acctctccggacaagctgaccacccgtgtgatcgatctgatcatgccgatcggcaagggg
cagcgggcgctgatcgtgtcgccgcccaaggcgggtaagaccacgatcatgcaggacatc
gcgaacgcgatcacccgcaacaacccggaatgccatctgatggtggtgctcgtcgacgag
cgtccggaagaggtcaccgacatgacacgttcggtcaagggtgaggtcatcgcctccacc
ttcgaccggccgccgtccgaccacaccacggtcgccgagctggccatcgagcgcgccaag
cgcctggtggagcagggcaaggacgtcgtggtgctgctcgactcgatcacccgtctcggc
cgtgcgtacaacaacgcgtcgcctgcgtcgggccgaatcttgtccggtggtgtcgactcg
accgcgctgtacccgccgaagcgtttcctcggcgccgcgcgcaacatcgaggagggcggt
tcactgaccatcgtcgccaccgcgatggtggagaccgggtcgaccggtgacacggtgatc
ttcgaggagttcaagggcaccggcaacgccgagctgaagctggatcgcaagatcgccgag
cgtcgggtgttcccggccgtcgacgtgaacccctcgggcacccgcaaggacgagctgctg
ctcggcccggacgagttcgcgatcgtgcataagctgcgccgggtgctgtccggtctcgac
agccatcaggccatcgacctgctgatgagccagctgcgcaagaccaagacgaattacgag
ttcctggtgcaggtctccaagaccgcgcctgggttggcggaccacgactga
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