Mycolicibacterium doricum: MDOR_30570
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Entry
MDOR_30570 CDS
T06662
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mdr
Mycolicibacterium doricum
Pathway
mdr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MDOR_30570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdr03400
]
MDOR_30570
Enzymes [BR:
mdr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MDOR_30570
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MDOR_30570
DNA repair and recombination proteins [BR:
mdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MDOR_30570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
BBZ08888
UniProt:
A0A1X1TJH2
LinkDB
All DBs
Position
complement(3106447..3107310)
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AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLPIGRVDVSAFSVLKTFDPPITALHGREVTGAHRWGKYLG
LQAGDLHLITHLSRAGWLRWSDKLAAVPLKPGKGPIALRVHLGPPGAAPGFDLTEAGTQK
RLAVWLVDDPVNVPGIATLGPDALELTTEDLGALLGKQGGRIKTVITDQKVMAGIGNAYS
DEILHLARLSPFATANKLTTAQLGTLHDAMCSVLTDAVCRSVGQQAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGRVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtcgaagcactggcggaccacctgcggcgccacgccgtcgga
ctgccgatcggacgagtcgacgtgtcggcgttctcggtgctcaagacgttcgacccgccg
atcaccgcactgcacggccgtgaggtcaccggcgcgcaccgctggggcaagtacctcggg
ctgcaggccggtgacctccatctgatcactcatctgtcccgcgccggctggctgcgctgg
tcggacaagctggcggccgttccgctgaaacccggcaaggggccgatcgccctacgggtg
cacctcgggcccccgggtgcggcgcccggtttcgacctcaccgaggcaggcacccagaag
cggctggcggtctggctcgtcgacgacccggtgaacgtccccgggatcgcgacgctcgga
ccggacgcgctggagttgaccaccgaggacctcggtgccctgctgggcaagcagggtggc
cgcatcaagaccgtgatcaccgaccagaaggtgatggccgggatcggcaacgcctacagc
gacgagatcctgcacctggcgcggttgtcgccgttcgccaccgccaacaaactcaccacc
gcccaactgggcaccctgcacgatgcgatgtgttcggtgctcacagacgcggtctgtcgg
tcggtgggccagcaggccgcgacgctcaagggggagaagcggtctgggctacgggtgcat
gcgcgtaccggtctaccgtgtccggtgtgtggggacacggtgcgtgaggtgtcgttcgcc
gacaagtcgttccagtactgcccgacgtgtcagaccggtggcagggtgctcgccgaccgc
cggatgtcgcgcctgctgaagtag
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integrated database retrieval system
