KEGG   Mesomycoplasma dispar: MDIS_03725
Entry
MDIS_03725        CDS       T03700                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mds  Mesomycoplasma dispar
Pathway
mds03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mds00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MDIS_03725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mds03400]
    MDIS_03725
DNA repair and recombination proteins [BR:mds03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MDIS_03725
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MDIS_03725
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran RsgA_GTPase SMC_N nSTAND3 AAA_16 AAA_29 nSTAND1 DnaJ_CXXCXGXG AAA_33 AAA_25 AAA_14 NACHT ATPase_2 APS_kinase AAA_22 FtsK_SpoIIIE ATPase NB-ARC Viral_helicase1 MMR_HSR1 DNA_pol3_delta2 cobW DAP3 RNA12
Other DBs
NCBI-ProteinID: AJR12439
UniProt: A0AAJ5NR13
LinkDB
Position
complement(982003..984846)
AA seq 947 aa
MTKNKDTHNFIYIKGARENNLKNIDLVIPKNKLVVFTGLSGSGKSSLAFNTIYEEGKRRY
IDSLSSYARQFLGGTKKPKVEAIYGLSPTISVEQKTSHNNPRSTVGTITEIYDYFRLLFA
KIGKPFCPNHKVEIVAQKIVAILATILSRPEKTRVIIMAPVVEMEKGSHRNLIENLKNQG
FLRVKINDVFYYLADEINLDPKQKHTISVVIDRFLLEKEEENRLQSALELAFDLGKGIVL
CEFDGSETVRFSKLQACPFGDFEMPNLENRLFSFNSPYGMCKTCKGLGTNLEADFDLIVP
DKNLTINQGAIKYFGKSVNTKSLEWQEFKILLDYFEIPTDLEIAKMNKKQLDVIKYGTKE
SLNYWLISESGKRYDYFRPIEGVLSKIQRKFWETTSEDLRLWFKKMMSEFLCSACKGARL
NDYALAVLIENYNIFQLSQLSIKDLIIFFEGLKLTEFDQKISTLILSEIKSRLSFLANVG
LEYLTLSRSAATLSGGESQRIRLASQVGSQLTGILYVLDEPSIGLHQKDNDKLIATLKKM
VEIGNSLIVVEHDFETILAADYLVDIGPKAGENGGFLVAAGSIKDIENEPKSITGQFLTG
KLQIPIPKKRRSGNGQFIIIEKATENNLKKININVPLGKFVVVSGVSGSGKSTLVNQIIV
NAVSKHLGATNVRVGKCAEIKGLFNIDKLVAINQSPIGRTPRSNPATYTSVFDDIREVFA
NTEQARALGFSKSKFSFNLQTGRCDKCQGDGQIKIEMHFMPDIYVLCDHCQGKRYKPDVL
QIRFHGKTIADILDLTVSAALEFFHNWPKIVAKLQTLIDVGLGYIKLGQSAITLSGGEAQ
RIKLATFLQKKPTGKSLFVLDEPTTGLHNYDVANLIKVLDRIVDNGDSVIVIEHNLEVIK
VADYIIDLGPNGGDDGGRIVAKGTPEAIANVKDSYTGAYLKTILNTK
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgactaaaaataaagacactcataattttatttatattaaaggtgcacgcgagaacaat
ttaaaaaatattgatcttgtaataccaaaaaataaacttgttgtttttactgggctttca
ggttcaggaaaatcttcgctcgctttcaatacaatttacgaagaaggaaaacgccgttat
atcgattcgcttagttcgtatgctcgtcaatttttaggtggtacgaaaaaaccaaaagtt
gaagcaatttacggactttcgccaacaatttcggttgaacaaaaaacaagccataacaat
ccgcgttcaaccgtaggaacaattacagaaatttatgattattttcgacttttgtttgca
aaaattggtaaacctttttgtcctaatcataaagttgaaattgttgctcaaaaaattgtt
gcaattttagcaacaattttatcacgtccagaaaaaactagagttataattatggctcct
gttgtggaaatggaaaaaggaagtcatcgaaatttgattgaaaaccttaaaaatcaaggt
tttctacgtgtgaaaattaatgatgttttttattatcttgctgatgaaattaatttggat
ccaaaacaaaaacatacaatttcggtagttattgatcggtttttactcgaaaaagaagag
gaaaaccgccttcagtcagcgcttgaacttgcttttgatcttggcaaaggaattgtgctt
tgtgaatttgatggatcagaaactgttagattttcaaaattacaggcctgcccgtttggc
gattttgagatgccaaatcttgaaaaccgccttttttcctttaattcaccttatggaatg
tgtaaaacttgtaaaggtttagggacgaatttagaggctgattttgatcttattgttcct
gataaaaatttgactatcaatcaaggtgcgattaaatattttggtaaatcggtaaataca
aaatcacttgaatggcaagaatttaaaattttgcttgactattttgaaattccaactgat
ttagaaattgctaaaatgaacaaaaaacaacttgatgtgattaaatatggcacaaaagag
tcgctaaattattgactaatttccgaaagtggcaagagatatgactattttcggccgatt
gaaggggttttaagcaaaattcagcgaaaattctgagaaacaacaagtgaagatttgcgt
ctttgatttaaaaaaatgatgtctgaatttctttgcagcgcctgcaaaggagcaagactt
aatgattatgctctcgctgttttaattgaaaattataatatttttcagttatcacaactt
tcaattaaagatttaataattttttttgaaggtttaaaattaactgaatttgatcaaaaa
atttcgacattaatattatcagaaattaaatctcgcctttcatttttagcaaatgttggg
cttgaatatttgactttgagccgttcagcagcaactttgtctggaggtgagtcgcaacga
attcgccttgcaagtcaagttggttcgcaactgactggaattctctacgttcttgacgaa
ccttcaatcggtttgcaccaaaaagataatgataaattaattgcaactttgaaaaaaatg
gtagaaatcggaaatagtttgattgttgtcgaacacgattttgagactattttggcagca
gattatcttgttgatattggtccaaaagcgggtgaaaacggtggttttttagttgcagct
ggttcgattaaggatattgaaaatgagccaaagtcgattacaggtcagtttttaactgga
aaattgcaaattccaatcccaaaaaagcgtcgcagtggtaacggtcagtttattatcatc
gaaaaagcaactgaaaataatttgaaaaaaattaatattaatgttccgttaggtaaattt
gttgttgtttctggtgtttcagggtcaggaaaatcgacattagtgaaccaaattatagta
aatgcagtttctaaacatcttggcgcaaccaatgttcgagttggaaaatgcgctgaaatt
aaggggctttttaatattgataagttagttgcaatcaatcaaagtccaattgggcgaaca
ccgcgctcaaatccagcaacttatacttcagtttttgatgatattcgcgaagttttcgcg
aatacggaacaggcaagagcgcttggattctcaaagtcaaaattctcctttaatttacaa
actggacgctgtgataaatgtcaaggagatggtcaaattaaaattgaaatgcattttatg
cctgatatttatgttttatgcgaccattgtcaaggaaaaagatacaaacccgatgttctg
caaattcgttttcatggtaaaactattgctgatattcttgatttaactgtttcagcagca
cttgaattttttcacaattgacctaaaattgttgcaaaattacagactttaattgatgtt
ggcctcggttatataaaacttggtcaatcagcgataactttatctggtggcgaagcacaa
aggattaaattagcaacttttttgcaaaaaaaaccaactggaaagtcactttttgttctt
gatgaaccaacaaccggtcttcataattatgatgtggcaaatttaattaaagttttagac
cgaattgttgataatggtgatagcgtaattgtaatcgaacataatttagaggttattaaa
gttgctgattacattattgatttaggacctaatggcggagatgatgggggtcgaattgtc
gcaaaaggaactccagaagctattgcaaatgttaaagattcttatactggcgcttattta
aaaacaattttaaatacaaagtaa

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