Mesomycoplasma dispar: MDIS_03725
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Entry
MDIS_03725 CDS
T03700
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mds
Mesomycoplasma dispar
Pathway
mds03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MDIS_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mds03400
]
MDIS_03725
DNA repair and recombination proteins [BR:
mds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MDIS_03725
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MDIS_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
RsgA_GTPase
SMC_N
nSTAND3
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_33
AAA_25
AAA_14
NACHT
ATPase_2
APS_kinase
AAA_22
FtsK_SpoIIIE
ATPase
NB-ARC
Viral_helicase1
MMR_HSR1
DNA_pol3_delta2
cobW
DAP3
RNA12
Motif
Other DBs
NCBI-ProteinID:
AJR12439
UniProt:
A0AAJ5NR13
LinkDB
All DBs
Position
complement(982003..984846)
Genome browser
AA seq
947 aa
AA seq
DB search
MTKNKDTHNFIYIKGARENNLKNIDLVIPKNKLVVFTGLSGSGKSSLAFNTIYEEGKRRY
IDSLSSYARQFLGGTKKPKVEAIYGLSPTISVEQKTSHNNPRSTVGTITEIYDYFRLLFA
KIGKPFCPNHKVEIVAQKIVAILATILSRPEKTRVIIMAPVVEMEKGSHRNLIENLKNQG
FLRVKINDVFYYLADEINLDPKQKHTISVVIDRFLLEKEEENRLQSALELAFDLGKGIVL
CEFDGSETVRFSKLQACPFGDFEMPNLENRLFSFNSPYGMCKTCKGLGTNLEADFDLIVP
DKNLTINQGAIKYFGKSVNTKSLEWQEFKILLDYFEIPTDLEIAKMNKKQLDVIKYGTKE
SLNYWLISESGKRYDYFRPIEGVLSKIQRKFWETTSEDLRLWFKKMMSEFLCSACKGARL
NDYALAVLIENYNIFQLSQLSIKDLIIFFEGLKLTEFDQKISTLILSEIKSRLSFLANVG
LEYLTLSRSAATLSGGESQRIRLASQVGSQLTGILYVLDEPSIGLHQKDNDKLIATLKKM
VEIGNSLIVVEHDFETILAADYLVDIGPKAGENGGFLVAAGSIKDIENEPKSITGQFLTG
KLQIPIPKKRRSGNGQFIIIEKATENNLKKININVPLGKFVVVSGVSGSGKSTLVNQIIV
NAVSKHLGATNVRVGKCAEIKGLFNIDKLVAINQSPIGRTPRSNPATYTSVFDDIREVFA
NTEQARALGFSKSKFSFNLQTGRCDKCQGDGQIKIEMHFMPDIYVLCDHCQGKRYKPDVL
QIRFHGKTIADILDLTVSAALEFFHNWPKIVAKLQTLIDVGLGYIKLGQSAITLSGGEAQ
RIKLATFLQKKPTGKSLFVLDEPTTGLHNYDVANLIKVLDRIVDNGDSVIVIEHNLEVIK
VADYIIDLGPNGGDDGGRIVAKGTPEAIANVKDSYTGAYLKTILNTK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaataaagacactcataattttatttatattaaaggtgcacgcgagaacaat
ttaaaaaatattgatcttgtaataccaaaaaataaacttgttgtttttactgggctttca
ggttcaggaaaatcttcgctcgctttcaatacaatttacgaagaaggaaaacgccgttat
atcgattcgcttagttcgtatgctcgtcaatttttaggtggtacgaaaaaaccaaaagtt
gaagcaatttacggactttcgccaacaatttcggttgaacaaaaaacaagccataacaat
ccgcgttcaaccgtaggaacaattacagaaatttatgattattttcgacttttgtttgca
aaaattggtaaacctttttgtcctaatcataaagttgaaattgttgctcaaaaaattgtt
gcaattttagcaacaattttatcacgtccagaaaaaactagagttataattatggctcct
gttgtggaaatggaaaaaggaagtcatcgaaatttgattgaaaaccttaaaaatcaaggt
tttctacgtgtgaaaattaatgatgttttttattatcttgctgatgaaattaatttggat
ccaaaacaaaaacatacaatttcggtagttattgatcggtttttactcgaaaaagaagag
gaaaaccgccttcagtcagcgcttgaacttgcttttgatcttggcaaaggaattgtgctt
tgtgaatttgatggatcagaaactgttagattttcaaaattacaggcctgcccgtttggc
gattttgagatgccaaatcttgaaaaccgccttttttcctttaattcaccttatggaatg
tgtaaaacttgtaaaggtttagggacgaatttagaggctgattttgatcttattgttcct
gataaaaatttgactatcaatcaaggtgcgattaaatattttggtaaatcggtaaataca
aaatcacttgaatggcaagaatttaaaattttgcttgactattttgaaattccaactgat
ttagaaattgctaaaatgaacaaaaaacaacttgatgtgattaaatatggcacaaaagag
tcgctaaattattgactaatttccgaaagtggcaagagatatgactattttcggccgatt
gaaggggttttaagcaaaattcagcgaaaattctgagaaacaacaagtgaagatttgcgt
ctttgatttaaaaaaatgatgtctgaatttctttgcagcgcctgcaaaggagcaagactt
aatgattatgctctcgctgttttaattgaaaattataatatttttcagttatcacaactt
tcaattaaagatttaataattttttttgaaggtttaaaattaactgaatttgatcaaaaa
atttcgacattaatattatcagaaattaaatctcgcctttcatttttagcaaatgttggg
cttgaatatttgactttgagccgttcagcagcaactttgtctggaggtgagtcgcaacga
attcgccttgcaagtcaagttggttcgcaactgactggaattctctacgttcttgacgaa
ccttcaatcggtttgcaccaaaaagataatgataaattaattgcaactttgaaaaaaatg
gtagaaatcggaaatagtttgattgttgtcgaacacgattttgagactattttggcagca
gattatcttgttgatattggtccaaaagcgggtgaaaacggtggttttttagttgcagct
ggttcgattaaggatattgaaaatgagccaaagtcgattacaggtcagtttttaactgga
aaattgcaaattccaatcccaaaaaagcgtcgcagtggtaacggtcagtttattatcatc
gaaaaagcaactgaaaataatttgaaaaaaattaatattaatgttccgttaggtaaattt
gttgttgtttctggtgtttcagggtcaggaaaatcgacattagtgaaccaaattatagta
aatgcagtttctaaacatcttggcgcaaccaatgttcgagttggaaaatgcgctgaaatt
aaggggctttttaatattgataagttagttgcaatcaatcaaagtccaattgggcgaaca
ccgcgctcaaatccagcaacttatacttcagtttttgatgatattcgcgaagttttcgcg
aatacggaacaggcaagagcgcttggattctcaaagtcaaaattctcctttaatttacaa
actggacgctgtgataaatgtcaaggagatggtcaaattaaaattgaaatgcattttatg
cctgatatttatgttttatgcgaccattgtcaaggaaaaagatacaaacccgatgttctg
caaattcgttttcatggtaaaactattgctgatattcttgatttaactgtttcagcagca
cttgaattttttcacaattgacctaaaattgttgcaaaattacagactttaattgatgtt
ggcctcggttatataaaacttggtcaatcagcgataactttatctggtggcgaagcacaa
aggattaaattagcaacttttttgcaaaaaaaaccaactggaaagtcactttttgttctt
gatgaaccaacaaccggtcttcataattatgatgtggcaaatttaattaaagttttagac
cgaattgttgataatggtgatagcgtaattgtaatcgaacataatttagaggttattaaa
gttgctgattacattattgatttaggacctaatggcggagatgatgggggtcgaattgtc
gcaaaaggaactccagaagctattgcaaatgttaaagattcttatactggcgcttattta
aaaacaattttaaatacaaagtaa
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