Myotis daubentonii (Daubenton's bat): 132211815
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Entry
132211815 CDS
T10294
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04024
cAMP signaling pathway
mdt04340
Hedgehog signaling pathway
mdt04360
Axon guidance
mdt05200
Pathways in cancer
mdt05205
Proteoglycans in cancer
mdt05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132211815 (PTCH1)
04024 cAMP signaling pathway
132211815 (PTCH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
132211815 (PTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132211815 (PTCH1)
05205 Proteoglycans in cancer
132211815 (PTCH1)
09162 Cancer: specific types
05217 Basal cell carcinoma
132211815 (PTCH1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
132211815
NCBI-ProteinID:
XP_059512389
LinkDB
All DBs
Position
11:7569673..7645133
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AA seq
1447 aa
AA seq
DB search
MASAGNAAEPQDHGGGGSYSGAPGRPAGGGRRRRTGGLRRHAAPDRDYLHRPSYCDAAFA
LEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANL
ETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDS
ALQASRVHVYMYNRHWKLEDLCYKSGELITETGYVDQIIEYLYPCLIITPLDCFWEGAKL
QSGTAYLLGKPPLQWTNFDPLEFLEELKKINYRMDSWEKMLNKAEVGHGYMDRPCLNPAD
PDCPATAPNKNATKPLDMALVLSGGCHGLSRKYMHWQEELIVGGTVKNSTGKLISAHALQ
TMFQLMTPKQMYEHFKGYDYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSSQKVLS
FTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSV
AAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL
KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLY
RREDRRLDIFCCFTSPCVSRVIQVEPQAYTETHDGPRASPPPPYSSHSFAHETQITMQST
VQLRTEYDPHTHVYYTTAEPLSEISVQPVTLTQDTLGGQSPESTSSTRDLLSQFSDSSLH
CLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIV
PRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSTVKYVMLEENRQLP
KMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQ
LTKRRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRL
RIPAAEPIEYAQFPFYLNGLHDTSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQY
IGLRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAV
PVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLA
GSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPHPEVSPANGLSRLPTPSPEPP
PSVVRFAVPPGHANNGSDSSDSEYSSQTTVSGISEELRQYEAQQGSRGPARQVIVEATEN
PVFARSSVVHPEARHHPPSSSRLPPHLDSGSLPPGRPGPQPQREPPREGLRPPPYRPRRD
AFEISTDGHSGPSNRDRVGPRGARAHTPRHPVFTATGGSVPSYCQPITTVTASASVTVAV
HPPPAPGRHPRGGLYPGYEDYPQPDPGLFEDPHVPFNVRCERRGSKVEVIELQDMECEER
PRGSSSS
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagctggtaacgccgcggagccccaggatcacggcggcggcggcagctacagc
ggggccccgggccggccggccggaggcgggaggcgcagacgaaccgggggtctgcgccgc
cacgccgcgccggaccgggactatctgcaccggcccagctactgcgacgccgccttcgct
ctggagcagatttccaaggggaaagctactggccggaaagcgccgctgtggctgcgagcg
aagtttcagagactcttatttaaactgggttgttacattcaaaaaaactgcggcaagttc
ttggtcgtgggcctcctcatatttggggccttcgctgtgggattaaaggcagctaatctg
gagaccaacgtggaggagctctgggtggaagttggtggacgagtaagtcgtgaattaaat
tatactcgccagaagattggagaagaggctatgtttaatcctcaactcatgatccagacc
ccaaaagaagaaggtgctaacgtcctgaccacagaagcgctcctccaacacctggactca
gcactccaggccagccgggtccacgtgtatatgtataacaggcattggaaattggaagat
ttgtgttacaaatccggagaacttatcacagaaacaggttacgtggatcagataatagaa
tatctttacccttgtttaattatcacgcctttggactgcttctgggaaggggccaagttg
cagtctgggacagcatacctactaggtaagcctcctttgcagtggacaaactttgaccct
ttggaattcctagaagagttaaagaaaataaactaccggatggacagctgggagaaaatg
ctgaacaaggcggaagttggccatggctacatggaccggccctgcctcaacccagcggat
ccagactgccccgccaccgcccccaacaaaaatgccaccaaacctcttgatatggccctt
gttctgagtggcggatgtcatgggttgtccaggaagtacatgcactggcaggaggagctg
attgtgggtggcacggtcaagaacagcactgggaagctcatcagtgcgcacgccttgcag
accatgtttcagttaatgactcccaagcagatgtacgaacacttcaaggggtacgactat
gtctcacacatcaactggaatgaggacaaggccgcggccatcctggaggcgtggcagagg
acctacgtggaggtggttcatcaaagcgtcgcccagaactcctctcagaaggtgctttcc
ttcaccaccacgaccctggacgacatcctcaagtccttctcggacgtcagcgtcatccga
gtggccagcggctacttgctgatgcttgcctatgcctgtttaaccatgctgcgctgggac
tgctccaagtcccagggtgccgtggggctggctggcgtcctgttggtcgcactgtcagtg
gctgcaggattgggcctgtgctcactgatcgggatttcctttaatgctgcaacaactcag
gtcttgccgtttctcgctcttggcgttggtgtggatgatgtgttcctgctggcccacgca
ttcagcgaaacggggcagaacaaaagaatcccttttgaggacaggaccggggagtgcctc
aagcgcacgggagccagcgtggccctcacgtccatcagcaacgtcaccgccttcttcatg
gctgcgttgatcccaatccctgccctgagggccttctccctgcaggcggctgtggtggtg
gtcttcaacttcgcgatggtgctgctcatcttccctgcgatcctcagcatggacctgtac
cggcgcgaggaccgcaggctggacattttctgctgtttcacaagcccctgtgtcagcaga
gtgatccaggtcgagcctcaggcctacacggagacgcacgacggcccccgcgccagcccc
ccgcctccctacagcagccacagcttcgcccacgagacacagatcaccatgcagtccacg
gtgcagctccgcacggagtacgacccccacacgcacgtgtactacacgacggccgagccg
ctctccgagatctccgtgcagcccgtcaccctgacgcaggacacgctcggcggccagagc
cccgagagcaccagctccacgcgggacctgctctcccagttctccgactccagcctccac
tgcctcgagccgccttgtaccaagtggacgctctcatcgtttgccgagaaacactatgct
cctttcctcttgaagcccaaagccaaggtggtggtgatcttccttttcctgggcctgctg
gggctcagcctgtacgggaccacgcgcgtgcgcgacggcctggacctgacagacatcgtg
ccccgggaaaccagagagtacgacttcattgctgcacagttcaagtacttctccttctac
aacatgtacatcgtcacccagaaagcagactacccgaacatccagcacttgctgtacgac
cttcacaggagcttcagcacggtgaagtacgtcatgctggaagaaaacaggcagcttccc
aagatgtggctgcactacttccgggactggctgcaaggacttcaggacgcgttcgacagt
gattgggagacggggaaaatcatgccaaacaattacaaaaacggatccgatgatggggtc
ctcgcctacaaactcctggtgcagacgggcagccgtgataagcccatcgacatcagtcag
ttgaccaaacggcgcctggtggatgcggacggcatcatcaatcccagcgctttctacatc
tacctgaccgcttgggtcagcaacgaccccgtggcttacgccgcctcccaggccaacatc
cggccgcaccgtcccgagtgggtccacgacaaggccgactacatgccggagaccaggctg
cgaatcccagccgcagagcccatcgaatacgcccagtttcctttctacctcaacggcttg
catgacacctcagacttcgtggaagcgattgaaaaagtcaggaccatctgcaacaactac
acgagcctggggctctccagctaccccaacggctaccccttcctcttctgggagcagtac
atcggcctgcgccactggctcctgctgtccatcagcgtggtgctggcctgcacgttcctc
gtgtgcgccgtcttcctcctgaacccctggaccgcggggatcattgtgacggtcctggcg
ctgatgacggtcgagctctttggcatgatgggcctcatcggaatcaagctgagcgccgtg
cccgtggttatcctgatcgcgtctgtcggcatcggcgtggaattcaccgttcacgttgct
ctggccttcctcacggccatcggcgacaagaaccgcagggccgtgctcgccctggagcac
atgttcgcgcccgtcctcgacggggccgtgtccacgctgctgggggtgctgatgctggcg
gggtcggagtttgatttcatcgtcaggtatttctttgccgtcctggcgatcctgacgatc
ctgggggtcctgaacgggctggtgctgcttccagtcctgctgtccttctttgggccgcac
cctgaggtgtctccagccaacgggctgagccggctgcccacgccctcccccgagccaccc
cccagcgtggtccgcttcgccgtgccccccggtcacgcgaacaacgggtctgactcctct
gactcggagtacagttctcagacgacggtgtcgggcatcagcgaggagctccggcagtac
gaggcccagcagggcagcaggggccctgcccgccaggtgatcgtggaggccacggagaac
cccgtcttcgcccgctcctccgtggtccacccggaagccaggcatcacccaccctccagt
tctcgactgccaccccacctggactcagggtccctgccacccggacggccaggcccgcag
ccccagcgggagcctcccagagaaggcttgcggccgcccccctacagaccgcgcagagac
gctttcgaaatttctactgacgggcattctggcccgagcaatagggaccgcgtgggcccc
cggggagcccgcgcgcacacccctcggcacccagtgttcactgccacgggcggctccgtg
cccagctactgccagcccatcaccaccgtgacggcctcggcgtccgtgactgtcgctgtg
caccccccgcccgcccccgggcggcacccccgaggggggctgtaccccggctacgaggac
tacccccagccggaccccgggctgttcgaggacccccatgtgcctttcaacgtccggtgc
gagaggaggggttccaaggtggaggtcatagagctgcaggacatggagtgcgaggagcgg
ccccggggcagcagctccagctga
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integrated database retrieval system
