Myotis daubentonii (Daubenton's bat): 132212357
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Entry
132212357 CDS
T10294
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdt03000
]
132212357 (RC3H2)
04121 Ubiquitin system [BR:
mdt04121
]
132212357 (RC3H2)
Transcription factors [BR:
mdt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
132212357 (RC3H2)
Ubiquitin system [BR:
mdt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132212357 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
132212357
NCBI-ProteinID:
XP_059513908
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All DBs
Position
11:complement(72900761..72944424)
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AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVSNTVTTTAGNVISVI
GSTEATGKIVPSTNGISNAENSVSQLIPRNADSALRALETVKKVGKVGTNGQNAAGPSSE
SVTENKIGSPPKTPVSSVAATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVTPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPMD
VMHSSVYQTSLRERFNSLDGYYSVACQQPSEPRTTVPLPRDPCGHLKTSCEEQIRRKPEQ
WAQYHTQKAPLVSPALPVATQSPTPPSPLFSVDFRTDLSDSVSGTKFEEDHLSHYSPWSC
GTIGSCINVIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISISDYVPYVNAVDSRWSSYGSESTSS
AHYIERDRFIVTDLSCHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEG
RHLTLNLLSKEIELRSGESDYTEDATDTKPDRDIELELSALDTDEPDGQSEQIEEILDIQ
LGISSQNDQLLNGTAVENGHPVQPHQKEPLEQKRQSLGEDHVILEEQKTILPVTACFSQP
LPVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVVANGKMINS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaacaaacttcaccgaaaagcttgtccctttgatcagactgccatcaacaccgac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagac
catcagtcaataaagttaagtaatctaggtgagaacaaacattatgaagttgcaaagaaa
tgtgttgaagatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaattgt
caactggtagaggaagaaggtcgtgtaagagccatgcgagcagcccgttcacttggagaa
cgaactgtaacggaactaatattacagcaccagaaccctcagcaattgtctgccaactta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctggcactagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagattagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttactaaaagagatgaagac
tcttctctgatgcaattaaaagaagaatttcggagctatgaggcattacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggacttcgtatttcacccgagcagtgg
tcctcacttctatatggtgacttagcgcataaatcacacatgcagtctattattgataag
ctgcaatctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccccaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtagttcatggccttgtggacttcatacagaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatataagactagcatgtgccgagatctaaga
cagcaaggagggtgtccacgaggaacaaactgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaagcaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaagcaacggggaaaattgttccaagtacaaatggaatttccaatgcagaa
aacagtgtttcccagctaatcccacgtaatgctgacagtgcattaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaatgctgctgggccttcgtcagag
tcagtaactgaaaataaaattggttctccacccaagactcctgtaagcagtgtagcagct
acctcagctgggccctctaatgttggaacagaactgaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaagaactcagataccctttgaagtcccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtgactccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcctccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattctccttaccaacctcctcctccgcagccatatgga
ccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagtaggcgcatctgg
cgtccacctatgtaccaacgagatgacattattagaagcaattctttacctcctatggat
gtgatgcactcgtctgtctatcagacgtctttgcgagaaagatttaactccttagatggg
tattattcagtggcttgtcagcagccaagtgaaccaaggacaactgtgcctttaccaaga
gatccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagaacag
tgggcacagtaccacactcagaaagcacctcttgtctctccagctcttcctgtggcaaca
cagtctccaacaccaccttctcctctgttcagtgtagactttcgcactgacctctctgac
agtgtgagtgggacaaaatttgaagaagaccatctttcccattattctccctggtcttgt
ggcaccataggctcctgtataaatgtcattgattcagagcccagagatgtgattgctaat
tcaaatgctgtgttaatggacctagacagtggagatgttaagagaagagtacatttattt
gaaactcagagaagaacaaaagaagaagacccaataattccttttagtgatggacctatc
atctcaaaatggggtgcaatttccagatcttcccgtacaggttaccataccacggatcct
gtccaggccactgcttcccaaggaagtgcgactaaacccatcagcatatcagattatgtc
ccttatgtcaatgctgttgattcaaggtggagttcttatggtagtgagtccacatcatca
gcacactatatcgaacgggacagattcattgttactgatttatcttgtcatagaaagcat
tccagtactggagaccttttaagcattgaacttcagcaggccaagagtaactcattgctt
cttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaaggc
cgtcaccttaccttaaatctactaagcaaggaaattgaattgagaagtggagagagtgat
tatacagaagatgcaactgatactaagcctgatagggatattgaattagaactatcggca
cttgacactgatgaacctgatggacagagtgaacaaattgaagagatcctggatatacaa
cttggtatcagttctcaaaatgatcagttgctgaatggaactgcagtggaaaatggacat
ccagtccaaccgcaccaaaaggagccactggagcagaagagacagagtttaggtgaagac
catgtgattctggaggagcaaaaaacaattctgccggtaacggcttgctttagccagcca
cttccagtgtccattagcaatgcaagttgcctccccatcaccacatctgtcagcgttggc
aacctcattctgaaaactcacgttatgtctgaagataaaaatgactttttaaaacctgtt
gttgcaaatgggaagatgattaacagctga
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