Myotis daubentonii (Daubenton's bat): 132212451
Help
Entry
132212451 CDS
T10294
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013
Nucleocytoplasmic transport
mdt05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132212451 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132212451 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132212451 (NUP188)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132212451 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
TRS130_4HB
Motif
Other DBs
NCBI-GeneID:
132212451
NCBI-ProteinID:
XP_059514224
LinkDB
All DBs
Position
11:77267581..77309114
Genome browser
AA seq
1750 aa
AA seq
DB search
MAAAAGELCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKAKKDVPSPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDLLKVVLQDERQSQA
LILKIADYYYEERMCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YRTEAPTWETHGSLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKLFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLLKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLSSGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVVSHEDGTLWRRQTPKLLYPLGRQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFMAHQVSNMSQMISAEGMSA
GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCIMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDHSSHTPSLQSLCICSLAYTEAGQTVINIM
GIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSITNNVIRLKPPSNVVSPLEQAL
TQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDAF
LTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGNDGSKEFSLGVWSCLHA
VLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGTL
SAPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVKS
LAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEILHLTDSAVRRQLFLDVLDGTK
ALLLVPASVSCLRLGSMMCTLLLILLRQWKRELGPVDEMLAPLTEILEGVLQADRQLMEK
TKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSATED
KDSMETDDCSRPRHKDQRDGQVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTL
EVSLRMKQNLHFTEAALHLLLTLARTQQGAAAVAGAGITQSICLPLLSVYQLSTNGTVQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTV
QSLACLEEADHTVGFILQLSSFMKEWHFHLPQLLRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGVPSAVAPRVQRPPTAAPAAPSSSSKQPTADTEASEQRALHVVQYGLLKILS
RTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALN
MLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHSRD
KQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGILLSPQGKSTSLSKASPESQEPLIQL
VQAFVRHVQR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgccggcgagctgtgtgtgaggagcagcagagaactgtggacaattctt
cttggaaggtcagctctgagagaactgaatcagattgaggcagaactgaataaacattgg
cagcggctattagaaggactttcatactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaaaaaagatgtaccttcaccactgaaggaactgggtttacgaatcagcaag
tttttgggtcttgacgaagaacagagtgtacagttactccagtgttaccttcaagaggat
tacagaggtactcgggacttactaaaggtggtactgcaagatgagaggcagagccaggcc
ttaatcctgaagattgcagattattattatgaagaaagaatgtgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacatccctatagggttgaatatgcagac
tgtgttgataaattggagaaggagctggttacaaaatacagacagcagtttgaagagctt
tatagaactgaagcaccaacgtgggagacacatggaagcctcatgactgagcgtcaggtg
tctcgctggtttgtccagtgccttcgggaacagtccatgctgctagaaattatcttcctt
tattatgcatactttgagatggcacctagtgacctattggtattaaccaagctgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagaccatggatcct
tttgtggatcggattggctactttagtgcccttatcctggtggaaggcatggatattgag
tcattgctcaagtgtgctttggatgacagaagagagctgcaccagtttgcccaggatggg
cttatttgccaggatatggaccgtttgatgttgacctttggggacattccacatcatgcc
ccggtgcttttggcctgggctctccttcgccacaccctgaatccagaagagacaagcagt
gttgtccggaagataggtggcacagccatccaactgaatgtatttcagtacttgacccga
ctacttcgctcactgtctagtgggggaaatgattgcaccaccagcaccgcatgcatgtgt
gtctatggactcctttctttcgtgctgacctcgctggagctacacacactgggcaatcag
caggatataattgacacagcatgtgaagtcttggcagacccttctcttccagaattattc
tggggaacagagccaacctctggtcttgggatcattctggacagtgtatgtggaatgttt
ccccatctcctctccccactcctacaattgctacgggccctcgtatcagggaagtctact
gccaaaaaggtatatagtttcttggataaaatgtctttctacaatgagctttataagcat
aagccccatgatgtggtctcccatgaagatggaactctctggcggaggcaaacacccaaa
ctcctttacccacttgggcgtcagaccaaccttcgcatacctcaaggcaccgtgggccaa
gtaatgctggacgatagggcttacctggtacgctgggagtactcgtatagcagctggacc
ctctttacctgtgagattgaaatgctgcttcatgttgtttccactgcagatgtgattcag
cactgtcagcgggtcaaacccatcattgatctggtccataaggtcatcagtacagatctt
tcgatagcagactgtctcctgcccatcacctcccgcatctacatgctgctgcagcggtta
acaacagtgatctccccccctgtggatgtcattgcttcttgtgtcaattgtttgaccgtt
ttggctgcccggaaccccgcaaaggtctggactgatcttcgtcacacaggctttttacca
ttcatggcccaccaggtctccaacatgagtcagatgattagtgcggaggggatgagtgct
ggagggtacggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact
attgcctttctccggttgatcaccactcttgtcaagggacagcttggtagtacccagagc
caaggactggtgccctgcatcatgtttgtgctgaaggagatgcttcccagctaccacaag
tggcgctacaactcccatggtgtgagagagcagattggttgcctaatcctggagctgatt
catgcgatactgaacctgtgccatgagacagaccacagcagccacacccccagcctgcag
tccctctgcatctgtagcctggcctatacagaagcaggacagacagttatcaatatcatg
ggcatcggcgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggggca
gagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccatcacc
aacaatgttattcggctgaaacctccttctaatgtggtatcccctctggaacaggctctc
acccaacatggtgcccatgggaacaacctcattgctgttcttgccaaatacatctaccac
aaacatgacccagctttgccacgtctggccatccagctgctgaaacgtctggccacggtg
gccccgatgtcagtgtatgcctgcttgggcaatgatgcggctgccattcgcgacgctttc
ctgacacgattgcagagcaagattgaggacatgcgcatcaaagtcatgatcctggaattc
ctcacggttgcagtagagactcagccaggcctcattgaactgtttctgaatctggaggtg
aaggatggcaatgatggctccaaggagttcagccttggggtgtggagctgtctccatgcg
gtcctggagctgattgactcccagcagcaggatcgctactggtgcccgcccctgctgcac
cgggcagccatcgcctttctgcatgccctgtggcaggaccggcgggacagtgccatgctg
gttctcaggaccaaacccaagttttgggagaatttaacaagtccactgtttggaaccctc
tctgctccctcagaaacatctgagcccagcatcctggaaacctgtgccctaatcatgaag
ataatatgcttggagatatactatgtagttaagggctcactagaccagtcactaaaagat
acactcaagaaattttccagtgagaaacgctttgcctactggtcagggtatgtcaagtcc
ttggcggttcacacagccgacacggagggcagcagctgtacctccttggtcgagtatcag
atgctggtctccgcctggaggatgcttctcattattgccaccagccacgcagagatactg
cacctgaccgactctgcagtgcgtcgccagctctttcttgatgtgcttgatgggaccaaa
gcgttactcctggtcccagcctcggtcagctgcctccgcctcggctccatgatgtgcact
ctgctgcttatcctcctgcggcagtggaagagagagttaggtcctgtggatgagatgctg
gcacccttgacagagatcctggagggagtgctgcaggcagaccggcagctcatggagaag
accaaggccaaggtgttctcggcattcatcactgtgctgcagatgaaggagatgagagtc
agtgacatcccccagtactctcagctagtgcttaacgtctgtgaaaccctccaagaagag
gtgattgcgctctttgaccagacccgccacagtctggcatcaggcagcgccacggaggac
aaggacagcatggagactgatgactgctctcggccccggcacaaggaccagcgtgatggg
caggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtagatgaggatggt
gactcatggctgcaggtgacccgcaggctccccatcctgccaaccctctttaccaccctg
gaggtgagccttcgcatgaagcaaaacctgcatttcaccgaggcagcgttgcacctgctc
ctcaccctggctcgcacccagcagggagccgcagcagtggctggagctggcatcacccag
agcatctgtttgcccctcctgagtgtgtaccagctcagcaccaatggcacggtgcagaca
cctagcacctctcggaaatccctcgatgccccctcttggccaggggtctatcgcctgtcc
atgtctttgatggaacggctcctcaaaactctgcgctacaacttcctgaccgaggctctg
gacttcgtgggtgttcaccaggagcggaccttacaatgcctgaacgcggtgaggacagtg
cagagtctggcgtgcctggaggaggcagaccacacggtgggcttcattctgcagctctcc
agcttcatgaaggagtggcatttccacctgcctcagctcctacgagatgtgcaggtcaac
ctgggttacctgtgccaggcctgcacctccctcctgcacagccggaagatgctgcagcac
tacctgcagaacaaaaatggggatggtgtcccctcagctgttgcaccccgagttcagcgg
ccacccacagctgctcctgccgccccctcctcttcctccaagcagcccactgctgacaca
gaggcttcggagcagcgagccttacatgtggtccagtatggcctcctcaagatcctcagc
aggactttggcggccctgcgccacttcaccccggacgtctgccagatcctgttggatcag
tccctggaccttgctgaatacaacttcctgtttgccctgagcttcaccactcccaccttt
gactctgaagtggccccctcctttgggacccttctggccacagtgaatgtggccctaaac
atgctcggagagctggataagaaaaaggagcccctcactcaggctgtggggctcagcaca
caggcagaagggaccagaacactgaagtccctcctgatgtttaccatggagaactgcttc
tacctgctcatctcccaggcaatgcgttaccttagggacccagctgtgcactcccgggac
aaacagcggatgaaacaggagctcagctcagagttgagcacgctgctctccagcctctcg
cgctacttccgcaggggagcccccagctcccctgctgctggcatcctcctctcgcctcag
ggcaagtccacctctctttccaaggccagccctgagagtcaggagcctctgatccagcta
gtacaggcctttgtccggcacgtgcaaagatag
DBGET
integrated database retrieval system