Myotis daubentonii (Daubenton's bat): 132213387
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Entry
132213387 CDS
T10294
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt01524
Platinum drug resistance
mdt03430
Mismatch repair
mdt05200
Pathways in cancer
mdt05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132213387 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132213387 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
132213387 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
132213387 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdt03400
]
132213387 (MSH6)
DNA repair and recombination proteins [BR:
mdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132213387 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
nSTAND_NTPase5
WPP
Motif
Other DBs
NCBI-GeneID:
132213387
NCBI-ProteinID:
XP_059515882
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Position
12:complement(54598104..54617727)
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AA seq
1356 aa
AA seq
DB search
MSRQSTLYSFFPKSPAGLSNAGKASVKASGEGGAAAAAGASPSPSEEVARSEVGPGRSAS
PSEARNLNGGLRRSTTPAVSSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIREKG
KSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADEALT
KDKIKRLELAVCDEPSEPEEEEMEVGATYPSDKNEEDNEIESEEEVRPKVQGSRRSSRQI
KKRRVISDSESDNGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLHSFAKVAPKRKRMVT
GNGSLKRKSSRKEMPPVSKRATGISSETRSTLCAFSAPQNSESLAHISGRCDDNSRPAVW
YHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMKKWWQIKSQNFDLVI
FYKVGKFYELYHMDALTGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ
TETPEMMEARCRKMAHISKHDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLSLKEK
EEDTSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFERGNLSTET
KMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEEYFKEKLNEDSGVVLPHVLKGMTSE
SDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSVKRPDAV
FSKVNQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP
FAINDRLDAIEDLMFVPDKITEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMY
EETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVITLRTKNPEGHFPDL
TVELNRWDTAFDHEKARKTGVITPKVGFDSDYDQALADIKENEQSLLEYLEKQRSRIGCR
TIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERR
DVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVVLLPKED
TPVFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEKEEENGKASCVLVTGPNMGGKSTLM
RQAGLLVVIAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHA
TAHSLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRL
GHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE
KTTHSLRLFREVCLASERSTLDAEAVHKLLTLIEEL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctcccgcggggctgagtaat
gccggcaaggcctcggtcaaggcctcaggtgaaggcggcgccgccgctgccgccggggcc
tccccttcccccagcgaggaggtggcccggagcgaggtcgggcctgggcgctccgcgtcg
ccgtccgaggcgaggaacctcaacggagggctgcggaggtcgacaactcctgcggtttcc
tccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggagggttatccc
tggtggccttgcttggtttacaaccacccttttgatggaacattcatccgtgagaaaggg
aagtctgcccgagttcatgtacagttttttgatgacagcccaacaaggggatgggttagc
agaaggctattgaagccatatacaggttcaaaatcaaaggaagcccagaaaggaggtcat
ttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgcagatgaagccttgact
aaagataagattaagaggcttgaattggcagtgtgtgatgagccctcagaaccagaggag
gaagaaatggaggtaggtgcaacttatccatcagataagaatgaagaagataatgaaatt
gagagtgaagaggaagtgcggcctaaggtgcaaggatctaggcgaagtagccgccaaatt
aaaaaacggagagtcatatcagactctgagagtgacaacggtggctctgatgtggaattc
aagccagatgctaaggaggaaggaagcagtgatgaaataagcagtggagtgggggatagt
gacagtgaaggcctgcatagctttgccaaagttgctccaaagcggaagagaatggtgact
ggaaacggctctcttaaaaggaaaagttcaaggaaggaaatgccccccgtcagtaaacga
gcaactggcatttcctcagaaaccaggagtactctgtgtgctttctctgcccctcaaaat
tctgaatccctagcccacattagtggaagatgtgatgataatagtcgcccagctgtctgg
tatcatgaaactttagaatggctcaaggaggaaaagagaagagatgtgcacaggaggcga
cccgatcatccagattttgatgcatctacactctatgtgcctgaggatttccttaattcc
tgtactcctgggatgaagaagtggtggcagattaagtctcagaactttgatcttgttata
ttttataaggtggggaagttttatgagctgtaccacatggatgctcttactggagtcagt
gaactagggctggtattcatgaaaggcaactgggcccattctggtttccctgaaattgca
tttggccgatactcagattctctggttcagaagggttataaagtagcacgggtggaacag
actgagaccccagaaatgatggaggcaagatgccgaaagatggcacatatatctaagcat
gatagagtggtgaggagggagatttgtaggatcattactaagggtacacagacgtacagt
gtgctggaaggtgacccctctgagaactacagtaagtatcttcttagccttaaagaaaaa
gaggaagatacttctggccacactcgagtatatggtgtatgctttgttgatgcctcactg
ggaaagtttttcataggtcagttttcagatgatcgccattgctcaaggtttaggactctt
gtggcacattatcctccagtacaagtattgtttgagagaggaaatctctcaacagaaacc
aagatgatcctgaagggttcattatcctcttctcttcaggaaggtctgataccaggctcc
cagttttgggatgcagccaaaactttgagaactcttcttgaagaagaatattttaaagaa
aagttaaatgaggacagtggggtggtattaccccatgtgcttaaaggtatgacttcagag
tctgattctcttgggttgacaccaggagagaagagtgaattggccctctctgctctaggt
ggttgtgtcttctacctcaaaaaatgccttatcgatcaggagcttttatcaatggctaat
tttgaagaatatattcccttggattctgacatggtcagtgttaaaagacctgatgctgtt
ttttctaaagtcaatcaacgaatggtgctagattctgtgacattaaacaacttggagatt
tttctgaatggaacaaacggttctactgaaggtaccctactagagaagattgatacttgc
catactccttttggtaagcggctcctaaagcagtggctgtgtgccccactgtgtaaccct
tttgctatcaatgatcgtttagatgctatcgaagacctaatgtttgtgcctgacaaaatc
actgaggttgtagatcttttaaagaagcttccagaccttgagaggctattgagtaaaatt
cataatgttgggtctccgttgaagagccagaaccacccagatagcagggctataatgtat
gaagaaactacatacagtaaaaaaaagattattgatttcctttctgctctggaaggattc
aaagtaatatgtaaaattatagggattatggaagaagtcattgatgactttaagtctaaa
attcttaagcaggtcattactctgcggacaaaaaatcctgaaggtcattttcctgattta
actgtagaactgaaccgatgggatacagcctttgaccatgaaaaggctagaaagactgga
gtgattactcccaaagtaggatttgactctgattatgaccaagctcttgctgacataaaa
gaaaatgagcagagcctcttggaatacttggagaaacagcgcagtcgaattggctgtaga
accatagtctattggggaattggtaggaaccgttaccagttggaaattccagagaatttc
accacccgtaatttgccagaagaatatgagttgaaatccaccaagaagggctgtaaacga
tactggaccaaaactattgagaagaagttggctaatttgataaatgcggaagaacggaga
gacgtatcattgaaggactgcatgcgacgactattctataactttgataaaaattacaag
aattggcaggctgctgtagaatgcatcgcagtgttggatgtcttattgtgcctggctaac
tatagtcgagggggtgatggtcctatgtgtcgtccagtagttctattaccaaaagaagac
actcctgtcttcttagaccttaaagggtcccgtcatccctgcattacgaagacttttttt
ggagatgactttattcctaatgacattctaataggctgtgaggagaaagaggaagaaaat
ggcaaagcttcttgtgtgcttgttactggacctaacatgggaggcaagtctacactcatg
agacaggctggcctattagttgtaattgcccagatgggttgttacgtacctgctgaagtg
tgtaggcttacaccaattgatcgagtgtttactagacttggtgcctcagacagaataatg
tcaggtgaaagtacattttttgttgaattgagtgaaactgccagtatacttacacatgca
acagcacattctctggtgctggtggatgaattaggaagaggtactgcaacatttgatgga
acagcaatagcaagtgcagttgttaaagaacttgctgagaatataaagtgtcgtacattg
ttttctacccactatcattcattagttgaagattattctcaaaacgttgcagtgcgctta
ggacacatggcatgcatggtagaaaatgaatgtgaagatcccagtcaagagactattacc
ttcctttataaattcattaagggagcttgtcctaaaagctatggcttcaatgcagcaagg
cttgctaatcttccagaggaggttattcaaaagggacatagaaaagcaagagaatttgag
aagacgactcattcactaagattatttcgggaagtttgcctggctagtgaaaggtcgact
ctagatgctgaagctgtccataagttgctgactttgattgaggaattatag
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integrated database retrieval system
