Myotis daubentonii (Daubenton's bat): 132213390
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Entry
132213390 CDS
T10294
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt01524
Platinum drug resistance
mdt03430
Mismatch repair
mdt05200
Pathways in cancer
mdt05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132213390 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132213390 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
132213390 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
132213390 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdt03400
]
132213390 (MSH2)
DNA repair and recombination proteins [BR:
mdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132213390 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
132213390
NCBI-ProteinID:
XP_059515892
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Position
12:complement(54784278..54844313)
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AA seq
934 aa
AA seq
DB search
MAVLPRETLQLESVAEYAFVRFFQGMPEKPSTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVIKYIGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSTSIGTVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALMIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAVASLSAVIKFLELLSDDSNFGQFELTTFDFHQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTLQGQRLVNQWVKQPLMDKNRIEERL
NLVEAFVEDAELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LENYKGKHQTLLLAVFVNPLVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDGLEKKMQSTLVSTARDLGLESGKQIKLDSNSQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSALTSLNEEYTKYKTEYQEAQDAIVKEIVNISSGYVEPMQTFNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGASQESDEMEPAAKRCHLEREQGEKIIQEFLSKVKQMPFIEMS
EENITMKLKQLKAEVIAKNNGFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgccgagggaaacgctgcagctggagagcgtggccgagtatgccttcgtg
cgctttttccagggcatgccggagaagccgagcaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccgggaggatgcgctgctggccgcccgggaggtgttcaagacg
cagggggtgatcaagtacatcgggccggcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcggcaatatagagtt
gaagtttataagaatagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccgggtaatctttctcaatttgaagatattctcttcggtaacaatgat
atgtcaacgtccattggtaccgtgggtgttaaaatgtctacagttgatggccaaagacag
gttggagttgggtatgttgattccatacaaaggaagctaggactgtgtgagttccccgat
aatgatcagttctccaatctggaggctctcatgattcaaattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttccacaaaagatatttatcaagac
cttaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtcctgccagaa
atggagaatcaggttgcagttgcatcattgtctgcagttatcaagtttttagaactcttg
tcagatgattcaaactttggacagtttgaactgactacttttgactttcaccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatacc
actggctctcagtctctggctgcattgctgaataagtgcaaaaccctgcaaggacaaaga
ctggttaaccagtgggttaagcagcctctcatggataagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagatgcagaattgagacagtgtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaactataaaggaaaacaccagacattgttgttggcagtttttgtgaatcctctt
gttgatcttcggtctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccacgaattccttgtaaagccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatggtttagaaaagaagatgcaatcaacattagtaagtacagct
agagatctaggtttggaatctggcaaacagattaaactggattcaaattcacagtttgga
tattattttcgcgtaacgtgtaaagaagaaaaagtccttcgtaacaacaaaaacttcagt
accgtagatatccagaagaatggtgttaaatttaccaatagtgcattgacttctcttaat
gaagaatataccaaatacaaaactgagtaccaagaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacattcaatgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtatcaaatggagcgccagttccatatgta
cgaccggtcattttggagaaaggacaaggaagaattattttgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcccaatgatgttcactttgaaaaagat
aaacagatgtttcatatcattactggccccaatatgggaggtaaatcgacatatattcgc
caaaccggggtaatagttctcatggcccaaattgggtgttttgtgccatgtgagtcggca
gaagtgtccattgtggactgtatcttggctcgggtaggggctggtgacagtcaattgaaa
ggagtctccaccttcatggctgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattctttaataattatagatgaattgggaagaggaacctctacctatgatggattt
gggttagcatgggctatatcagagtacattgcaacaaaaatcggtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaaccagataccaactgttaataatcta
catgtcacagcactaaccactgaagaaaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcacgttgcagagcttgctaattttcctaggcatgta
atagagtgtgctaaacagaaggcccttgaactagaggagtttcagaatatcggagcatca
caagaaagtgatgaaatggaaccagcagcaaagaggtgccatctggaaagagagcaaggt
gaaaaaattattcaagagtttttatccaaggtgaagcaaatgccttttattgaaatgtca
gaagaaaacatcacaatgaaattaaaacagctgaaagctgaggtgatagcaaagaataat
gggtttgtaaatgaaatcatttcacgaataaaggttactacgtga
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