KEGG   Myotis daubentonii (Daubenton's bat): 132215384
Entry
132215384         CDS       T10294                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
mdt  Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013  Nucleocytoplasmic transport
mdt04141  Protein processing in endoplasmic reticulum
mdt04150  mTOR signaling pathway
mdt05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mdt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132215384 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132215384 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    132215384 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    132215384 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdt03019]
    132215384 (SEC13)
   04131 Membrane trafficking [BR:mdt04131]
    132215384 (SEC13)
Messenger RNA biogenesis [BR:mdt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132215384 (SEC13)
Membrane trafficking [BR:mdt04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    132215384 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    132215384 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    132215384 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40
Other DBs
NCBI-GeneID: 132215384
NCBI-ProteinID: XP_059519523
LinkDB
Position
14:complement(23506183..23534703)
AA seq 396 aa
MRGPLWVSRAPHGERRAQRRARRCSPEPLCEQSALLPGDSCATARPASPTPEVRCRRRRR
ELPRPRPGATAAAAMVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG
QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSV
NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWDVKKINNAHTIGCNAVSWAPAVVPGS
LIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL
PTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKV
TLWKESVDGQWVCISDVNKGQGSVSASVTEGQQNEQ
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgagaggcccattgtgggtctcgcgcgcccctcacggagagaggagggcccagaggagg
gcgcggcgctgcagcccggaacctttgtgcgagcagagcgcgttgctacccggagactcc
tgcgctacagcccgtccggccagcccgacgccggaagtgaggtgtcggaggcgccgccgg
gagttgccacgtccgaggccgggagccaccgccgctgcagccatggtgtcagtaattaac
actgtggacacctcccatgaggacatgattcacgatgcccagatggactactatggcacc
cgcctggcaacctgctcatcagacaggtccgtcaaaatctttgatgtacgcaacggaggg
cagatcctcatcgcagacctcaggggtcatgagggaccagtgtggcaagtggcctgggcc
caccccatgtatggcaatatcctggcatcctgctcctacgaccgaaaagttattatctgg
aaagaggaaaacggcacctgggagaagacgcacgaacacacaggacacgactcctcagta
aattctgtgtgctgggccccccatgactatggcctaatcctggcctgtgggagctcagat
ggggccatctccctgctgacctacactggggaaggccagtgggatgtgaagaagatcaac
aatgctcacactattggctgcaatgctgtcagctgggcccctgctgttgtacctggaagc
ctcatagaccagccttcaggacagaagcccaactacatcaagaaatttgcctcaggcggc
tgtgacaacctcatcaagctgtggaaggaggaagaggatggccagtggaaggaggaacag
aagctggaagcacacagtgactgggttcgagacgtggcctgggccccttccattggtctc
cccaccagcaccatcgccagttgttcccaggatggtcgtgtgttcatttggacctgtgac
gatgcctcaagcaatacgtggtctcccaaactactgcacaagttcaatgatgttgtgtgg
cacgtgagttggtccatcacagccaacattctggccgtctcgggtggagataataaggtg
accctgtggaaggagtcagtcgacgggcagtgggtgtgcatcagtgatgtcaacaagggc
cagggttccgtgtctgcttccgtcacagagggccagcagaacgagcagtga

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