Myotis daubentonii (Daubenton's bat): 132216410
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Entry
132216410 CDS
T10294
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdt01001
]
132216410 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdt04121
]
132216410 (TRIM28)
Enzymes [BR:
mdt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132216410 (TRIM28)
Protein kinases [BR:
mdt01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
132216410 (TRIM28)
Ubiquitin system [BR:
mdt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132216410 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-B_box_Trim66
PHD_2
PHD-1st_NSD
zf-C3HC4
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
132216410
NCBI-ProteinID:
XP_059521541
LinkDB
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Position
15:complement(86172..92032)
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AA seq
844 aa
AA seq
DB search
MAASAAAASAAAATAASSSPGPSEGSAGGDKRAPAAAAASTAAPAAASGSASASASASSP
AGGGGEALELLEHCGVCRERLRPDREPRLLPCLHSACSACLGPPAPAAANSSGDAGAAGD
GAAVVDCPVCKQQCFSKDIVENYFMRDSGSKAPADSQDANQCCTSCEDNAPATSYCVECS
EPLCETCVEAHQRVKYTKDHTVRSTGPAKSRDGERTVYCSVHKHEPLVLFCESCDTLTCR
DCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKR
VQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFAS
WALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVA
ERPGTNSTGPAPMAPPRAPGPLSSKQGSGGSQPMDVQEGYGFASADDSYMSAEPHVSGMK
RSRSGEGEVSGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAA
AAGQPGTAPGTPGAQPLPGMAIVKEEETEAAIGAPPATEGLETKPVLMALAEGPGAEGPR
LVSPSGSTSSGLEVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDC
HLPALQDVPGEEWSCSLCHVLPDLKEEDGSLSLDGGDSSGVVAKLSPANQQKCERVLLAL
FCHEPCRPLHQLATDSSFSVDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQ
FNKLTEDKADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSSQELSSGP
GDGP
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcagcggcctcggccgcggcggcgacagccgcctcgagcagcccg
ggcccgagcgagggctcggcgggcggcgataagcgcgcccccgccgcggccgcggcttcg
actgcggcccctgcagcggcctcgggctcggcctcggcctcggcctcggcgtcgtcgccc
gcggggggcggcggcgaggcgctggagctgctggagcactgcggcgtgtgccgggagcgc
ctgcggcccgatcgggagccgcgcctgctgccctgcctgcactcggcctgcagcgcctgc
ctcgggccccccgcgccggccgccgccaacagctcgggggacgccggggcggcgggcgac
ggagccgcagtcgtggactgtcccgtgtgtaagcagcagtgcttctccaaagacattgtg
gagaactacttcatgcgcgacagcggcagcaaggcccccgcggactcccaggacgcgaac
cagtgctgcaccagctgcgaggacaacgccccggccaccagctactgcgtggagtgctcc
gagcccctgtgtgagacctgcgtggaggcgcaccagcgggtgaagtacaccaaggaccac
accgtgcgctccaccgggccagccaagtcccgagatggggagcgcaccgtgtactgcagc
gtgcacaagcacgagccgctggtgctgttctgcgagagctgcgacaccctcacctgccgg
gactgccagctcaacgcccacaaggaccaccagtaccagttcctggaggacgccgtgagg
aaccagcgcaagctcctggcctcgctggtgaagcgcctcggggacaagcatgccaccctg
cagaagaacaccaaggaggttcgcagctccattcgccaagtgtccgacgtgcagaagcgc
gtccaggtggacgttaagatggctatcctgcagatcatgaaggagctgaacaagcggggc
cgcgtgctggtcaatgatgcccagaaggtaacggaggggcagcaggagcgcctggagcgg
cagcactggaccatgaccaagatccagaagcaccaggagcacatcctgcgcttcgcctcc
tgggctctggagagcgacaacaacacggccctgctgctctccaagaagctgatctacttc
cagctgcaccgggctctcaagatgatcgtggaccccgtggagccccacggcgagatgaag
ttccagtgggacctcaacgcctggaccaagagcgccgaggccttcggcaagatcgtggcg
gagcgtcctggcaccaactccacgggccctgcgcccatggcccctccccgggctccggga
cccttgagcagcaagcagggctctggcggcagccagcccatggacgtgcaggaaggctat
ggctttgcgtcagcagatgactcttacatgagtgcagagccccatgtgtcaggcatgaaa
cggtcccgctcaggtgagggtgaagtgagcggcctcatgcgcaaggtgccccgggtgagc
ctcgagcgcctggatcttgacctcacagctgacagccagccgccagtcttcaaggtcttc
ccaggcagcaccaccgaggactacaacctgattgtcattgagcgcggggctgcagctgct
gctgccgggcagccggggactgcgcctggcacccctggtgcccagcccctgcctggcatg
gccattgtcaaggaggaagagacagaggctgccatcggcgccccgcctgccaccgagggc
ctggagaccaagcctgtgctgatggctctggcggagggccccggtgcggagggtccccgc
ctggtctcccccagtggcagcaccagctctggcctggaggtggtggctccagagggcacc
tcagccccagctggcggccctggtgccctggatgacagtgccaccatctgccgcgtctgt
cagaagccaggcgacctggtcatgtgcaaccagtgcgagttctgcttccacctggactgc
cacctgccggccctgcaggatgtgcccggggaggagtggagctgctcgctctgccacgtg
ctgcctgacctgaaggaggaggatggcagcctgagcctggacggtggggacagcagtggt
gtggtggccaagctctcaccagccaaccagcagaagtgtgagcgtgtcctgctggccctt
ttctgccacgagccctgccggcccctgcaccagctggctaccgactccagcttttctgtg
gatcagcctggtggcacattggacctgaccctgatccgcgcccgcctccaggagaagctg
tcgcccccctacagctcccctcaagagtttgcccaggatgtgggccgaatgttcaagcag
ttcaacaagctgacagaggacaaggcggacgtgcagtccatcatcggcctgcagcgcttc
tttgagactcggatgaatgaggcctttggtgacaccaagttctctgctgtcctggtggag
cccccaccgctgagcctgcctggtgccggcctgagctcccaggagctgtccagtggccct
ggtgatggcccctga
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