Myotis daubentonii (Daubenton's bat): 132218235
Help
Entry
132218235 CDS
T10294
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03030
DNA replication
mdt03420
Nucleotide excision repair
mdt03430
Mismatch repair
mdt03440
Homologous recombination
mdt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132218235 (RPA1)
03420 Nucleotide excision repair
132218235 (RPA1)
03430 Mismatch repair
132218235 (RPA1)
03440 Homologous recombination
132218235 (RPA1)
03460 Fanconi anemia pathway
132218235 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdt03000
]
132218235 (RPA1)
03032 DNA replication proteins [BR:
mdt03032
]
132218235 (RPA1)
03400 DNA repair and recombination proteins [BR:
mdt03400
]
132218235 (RPA1)
Transcription factors [BR:
mdt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132218235 (RPA1)
DNA replication proteins [BR:
mdt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132218235 (RPA1)
DNA repair and recombination proteins [BR:
mdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132218235 (RPA1)
MMR (mismatch excision repair)
132218235 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
132218235 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
GDH2_N
Motif
Other DBs
NCBI-GeneID:
132218235
NCBI-ProteinID:
XP_059525147
LinkDB
All DBs
Position
16:complement(22504537..22557830)
Genome browser
AA seq
616 aa
AA seq
DB search
MGGHLSEGAIAAIMQQGETSIKPILQVINIRPITTGNSPPRYRLLMSDGVNTLSSFMLAT
QLNTLVEGERLSSNCICQINRYIVNTLKDGRRVVILMELEVLKSAEAVGIKIGNPVPYNE
GHGQQQVVPSPVSATSPPASKPQPQNGSSGMGSTVSKAYGASKIFGKTGGTSLVNSSGGS
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLLDVNKVYYFTKGTLKIANKQFSAVKNDYEMTFNNETSVMPCEDGHNLPTVQF
DFTKIDDLESKPKDSLIDIIGICKSYEDAIKITVKSNNREVSKRNIYLMDMSGKVVSATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIILNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKGGGSAGSNTNWKTLYEVKLENLGHGDKADYFSAVATVVYLRKENSMYQA
CPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADYQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEIFQNANFRSFVFKIRVKLETYNDESRIKATVMDVKPVDYR
EYCRRLIMNIRRHAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggggggacacctgagcgaaggggccattgcggccataatgcaacagggagagacatcc
ataaaacccatcctccaagtcattaacatccgtcccatcactacagggaacagtccgccc
cgttatcgactgcttatgagtgatggggtgaacactctatcctcttttatgttggcaaca
cagttgaacactcttgttgaaggtgaacgattgtctagcaactgtatttgccagattaat
cgatatattgttaacacgctgaaagatggcaggagagtagttattttgatggagttagag
gttttgaaatcagcggaagcagttggaataaagattggcaatccagtgccctataatgaa
ggacacgggcagcagcaggtagttccttctccagtctcagcaaccagtccgccagccagc
aagccccagccacagaatgggagctcgggaatgggttccactgtatctaaggcttatggt
gcctcgaagatatttgggaaaactggaggtaccagcctagtgaacagttctgggggatca
caggccaaagtggtacccattgccagcctcaccccttaccaatccaaatggactatttgt
gctcgtgttaccaacaaaagtcagatccggacctggagcaactcccgaggggaagggaag
ctgttctccatagaactagtcgatgaaagtggtgaaatcagagctactgctttcaacgag
caagtggacaagttctttcccctccttgacgtgaacaaggtctattatttcactaaaggc
actctgaagattgccaacaaacagttctcagcagttaaaaacgactatgagatgaccttc
aataatgagacttctgtcatgccctgcgaggacggtcataatttacctacagttcagttt
gatttcacaaagatcgatgacctcgagagcaaacccaaggactcccttatcgacataatt
gggatctgcaagagctatgaagatgccattaaaatcacagtgaagtctaacaaccgagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtggtgtctgctactctg
tggggagaagatgctgataagtttgatggttctagacaacccgtgatggctatcaaagga
gccagagtctctgattttggtggacggagcctctctgtactgtcttcaagcacaatcatt
ttgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcggaaggacaa
gccttagatggtgtttccatctcagatctaaagggtggaggatcagcaggaagcaacacc
aactggaaaactttgtatgaggtgaaattggagaacctgggccacggcgacaaggcagac
tattttagcgctgtggcgacggtggtgtatcttcgcaaagagaactctatgtatcaggcc
tgcccaagtcaggactgcaataagaaagtgatcgatcaacagaacggattataccgctgt
gagaagtgtgaccgtgaatttcccaatttcaagtaccgcatgatcctgtcggtaaatatt
gccgattatcaagagaatcagtgggtcacttgtttccaggagtctgcagaggctatcctt
ggacaaagcactgcttacctcggagagctaaaggagaagaatgagcaggcgtttgaggaa
attttccagaatgccaactttcgatcttttgtgttcaagatcagagtcaaactagagacc
tacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatactgcagaaggctgatcatgaacatcaggagacatgcagccatgtga
DBGET
integrated database retrieval system
