Myotis daubentonii (Daubenton's bat): 132218803
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Entry
132218803 CDS
T10294
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132218803 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdt03400
]
132218803 (LIG3)
Enzymes [BR:
mdt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
132218803 (LIG3)
DNA repair and recombination proteins [BR:
mdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
132218803 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
132218803
NCBI-ProteinID:
XP_059526517
LinkDB
All DBs
Position
16:complement(44709615..44731277)
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AA seq
1140 aa
AA seq
DB search
MTLAFKILFPPTLRVLSRKEVRLFQEHLWPDIKQFSQWKETGWLPGRCLLQKRKPILSFQ
KGNLRPRATCLAFLPGSHVGLCSGSCEMAEQRFCVDYAKRSTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQH
IADLSSKAAGTPKKKAVVQAKLTATGQVTSPVKAASSVPNTNPRKFSGFSAAKPNNSGEA
CSSPTLKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNSKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGRRRALSVQASLMT
PVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKDGDHFSYFSRSLKPVLPHKVA
HFKEYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVSKASDLVDMINRVIREGLEGLVL
KDAKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFT
VVAGNEGSSTAGGNSGENEGTSGPAVPQKARTSPKQSSPSAKKAGGKLRHPNSKNGHKPT
AKPSPVKVGEKLVTKSPVKVGEKRKASDETPCHAKRRLASEPRGRRAVSAGRRCCWISSL
GCGSTCHPPHQTSAVSDATLWHLMGTWYRNLTWPQPHTCWVAGTRTLRPSRSPQSGSGHV
SGNEDWWLPARTAAFPLPPAYPSRLGQNPTGQRWTFFSKQRVFQNPPIVHGLSPARSQVL
GVPPGQSPSPVGLYRSSRSRCWFCCLLVFFKKELFFLFKIKYLAAISALPPLSPRNFPGD
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccaccaaccctccgtgtactcagccgaaaagaa
gtgcgtctattccaagaacatctctggccagacataaaacaattcagccagtggaaagaa
acaggttggcttcctgggcgctgcctcctccagaaaagaaagcccattctgtcatttcaa
aaaggcaatctaagaccacgtgccacctgccttgccttcttgccagggtcgcatgtgggg
ctctgcagcgggtcctgtgagatggccgagcaacggttctgtgtggactatgccaagcgt
agcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggtgtatgccgaatcggc
aaagtggtgcccaatcccttctcagagtcggggggtgatatgaaagagtggtaccacata
aaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctc
acagagctggaaggctgggaagagctggaagataatgaaaaggaacagataagccagcac
attgcagatctgtcttctaaggcagcaggcacaccgaagaagaaagccgttgtccaggcg
aagctgacagccacgggccaggtgacatctccagtgaaagctgcttcatctgttcccaat
accaatccccggaagttttctggcttttcagcagccaagcccaacaactctggggaagcc
tgctcaagccccacccttaagacaagtctgtcctcaagcaaatgtgaccccaaacacaag
gattgtctgctacgtgagtttcggaagttgtgcgccatggtggctgaaaatcctagctac
aattcaaagacccagatcatccaggactttcttcggaaaggctcagctggagatggtttc
cacggtgacgtgtacctaacggtgaagctgctgctgccgggtgttattaagagcgtttac
aacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcagcccagat
gatatggcacgagacctagagcagggtgacgtgtcagagacaatcagagtcttctttgag
cagagcaagtctttccccccagctgccaagagccttctcaccatccaggaggtggacgaa
ttcctcctgcggctctccaagctcaccaaggaggatgagcagcagcaggccctgcaggac
atcgcctccaggtgtacagccaacgaccttaaatgtatcatcaggttgatcaaacatgat
ctgaagatgaactcaggtgcaaaacatgtgttagacgccctcgaccccaatgcctatgaa
gccttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctgcacaacgagcag
gaggtggagaaggagccaggccggcggcgagctctgagcgttcaggcctcactgatgacc
ccggtgcagcccatgctggccgaggcctgcaagtccattgagtatgcgatgaagaagtgt
cctaacggcatgtactctgagatcaagtatgatggggagcgagtccaggtgcataaggac
ggagaccacttcagctacttcagccgcagtctcaagcccgtcctacctcacaaggtggcc
cactttaaggaatacatcccccaggctttccctgggggccacagcatgatcttggactct
gaggtgctcctgatcgacaacaagacaggcaaaccattgccctttggaacgctgggcgtg
cacaagaaagctgccttccaggatgctaatgtctgcttgtttgtttttgattgtatctac
ttcaatgatgtcagcttgatggacaggcctctgtgtgaacggcggaagtttcttcacgat
aacatggttgaaattcccaaccggatcatgttctcagaaatgaagcaagtttcgaaagca
tccgacttggttgacatgataaaccgggtgatccgagagggcctggaagggctggtgctg
aaggacgcaaagggtacatatgagcctggaaagcggcactggctgaaagtgaagaaagac
tatctgaatgagggggccatggctgacacagctgacctggtggtccttggggccttctat
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccaagc
agccagaagtggtgcacagtcaccaagtgttctggaggccatgatgatgcgacgctcgcc
cgcctgcagaaggagctggacatggtgaagatcagcaaggatcccagcaagatacccagc
tggctgaaaatcaacaagatctactatcccgacttcatcgtcccagacccgaagaaagct
gccgtgtgggagatcacaggggctgaattctccaaatccgaggctcacactgccgacggg
atctccatccggttccctcgctgcacccgaatccgggatgataaggactggaaatctgcc
accaacctcccccaactcaaggaactgtaccagctgtccaaggagagggcggacttcact
gtggttgctggcaacgaagggagctccactgcagggggcaacagcggggagaatgagggc
acttcggggcctgctgtgcctcagaaggccaggacctcccccaagcagtcctcccccagt
gccaagaaggcaggagggaagctgcgccaccccaacagcaaaaatggccacaagccgact
gcaaagccttcccctgtgaaagtgggggagaagctggtcacgaagtctcctgtgaaagtg
ggggagaagcggaaggcttctgatgagactccatgccacgcaaagaggcggctggccagt
gagccaagaggaaggagagctgtgtctgcaggcaggaggtgctgctggatatcttcactg
gggtgcggctctacctgccaccctccacaccagacttcagccgtctcagacgctactttg
tggcatttgatggggacctggtacaggaatttgacatggcctcagccacacacgtgctgg
gtagcagggacaagaaccctgaggcccagcaggtctccccagagtggatctgggcatgta
tccggaaacgaagactggtggctccctgctaggactgctgcctttcctctccctcctgcc
tacccttcccggctggggcagaacccaactgggcaaagatggactttcttctccaagcag
cgcgtcttccaaaacccaccaattgtgcatggtctctccccagccaggagtcaggtgctc
ggggtgccaccagggcagtcaccctctcctgtgggcttgtatagatcttccagatctagg
tgctggttttgttgtcttttagtgttctttaaaaaggagcttttcttcctttttaaaata
aaatatcttgcagctatctctgcccttcccccactctcaccccgtaatttccctggtgat
taa
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