Myotis daubentonii (Daubenton's bat): 132218840
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Entry
132218840 CDS
T10294
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04151
PI3K-Akt signaling pathway
mdt04510
Focal adhesion
mdt04512
ECM-receptor interaction
mdt04611
Platelet activation
mdt04820
Cytoskeleton in muscle cells
mdt04926
Relaxin signaling pathway
mdt04933
AGE-RAGE signaling pathway in diabetic complications
mdt04974
Protein digestion and absorption
mdt05146
Amoebiasis
mdt05165
Human papillomavirus infection
mdt05205
Proteoglycans in cancer
mdt05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132218840 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132218840 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132218840 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132218840 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
132218840 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
132218840 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
132218840 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
132218840 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
132218840 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
132218840 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
132218840 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132218840 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdt00536
]
132218840 (COL1A1)
Glycosaminoglycan binding proteins [BR:
mdt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132218840 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
132218840
NCBI-ProteinID:
XP_059526641
LinkDB
All DBs
Position
16:45977105..45994185
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AA seq
1459 aa
AA seq
DB search
MFSFADLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGIRYHDREVWKPEVCQICVCD
NGNVLCDDVICEDTKNCPGAVAPPGECCPVCPDGEVSPTDLETAGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGVSVPGPMGPSG
PRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG
PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGVPGQMGPRG
LPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSEG
PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSG
APGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLPGPPG
ERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPG
SPGPDGKTGPTGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPG
AVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGAPG
DLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGSQGAPG
LQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGETG
PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPAGPAG
PAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEG
GKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGSDGPAGSPGTPGPQGIAGQRGVVGLPG
QRGERGFPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPG
RDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPAGARG
PAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPG
SPGAAGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFMPQPP
QEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMC
HSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPTVAQKNWYISKNPKEKKHIW
FGESMTGGFQFEYGGQDSDPADVAIQLTFLRLMSTEASQNLTYHCKNSVAYLDQQTGNLK
KSLLLQGSNEIELRSEGNSRFTYTVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPL
DIGAPDQEFGMNVGPVCFL
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgcggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
atcaggtaccacgaccgagaagtatggaaacccgaggtctgtcagatctgcgtctgcgac
aatggcaacgtgttgtgcgatgacgtgatctgcgaggacaccaagaactgccccggcgcc
gtagcccccccgggcgagtgctgcccggtctgccccgacggcgaggtgtcgcctacggat
ctagaaaccgcaggagtcgagggacccaaaggagacacaggcccccgaggcccgagggga
cccgcaggcccccctggccgagatggcatccctggacagcctggccttcccggccccccc
gggccccccggacctcctggaccccctggcctcggaggaaactttgctccccagatgtct
tacggctatgacgagaaatcagctggagtttccgtgcccggtcccatgggtccttctggt
cctcgtggtctccctggcccccctggctcacctggtccccaaggtttccaaggcccccct
ggcgagcccggcgagcctggcgcttcaggtcccatgggtccccgtggtccccctggcccc
cctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcctggcgagcgtggg
cctcctggacctcagggtgctcggggattgcccggaacagctggtctccctggaatgaag
ggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcccgctggtccc
aagggtgagcctggtagccctggtgaaaatggagtccctggtcagatgggcccccgtggt
ctgcctggtgagagaggtcgccctggagcccctggccctgctggtgctcgtggaaacgat
ggtgctactggtgctgctggaccccctggtcccactggtcctgctggccctcctggattc
cctggtgctgttggtgctaagggtgaagctggtccccaaggatcccgaggctctgaaggt
ccccagggtgtgcgtggtgaacccggcccccctggtcctgctggtgctgctggccctgct
ggaaaccctggtgctgatggacagcctggtgctaaaggtgccaacggcgctcctggtatt
gctggtgctcctggcttccctggtgcccgaggcccctctggaccccagggccccagcggt
gcccctggccccaagggtaacagcggcgaacctggtgctcccggaaacaaaggagacact
ggcgccaagggagagcccggccccactggtattcaaggaccccctggccctgctggagag
gaaggaaagcgaggagcccgaggtgaacccggacctgccggcctgcccggaccccctggc
gagcgtggtggacctggtagccgtggtttccctggtgcagatggcgttgctggccccaag
ggccccgctggcgaacgcggttctcccggccccgctggccccaaaggctctcctggtgaa
gctggtcgccccggtgaagctggtctgcctggtgccaagggtctgactggcagccctggc
agccctggtcctgatggcaaaactggccccactggtcccgctggtcaagatggtcgcccc
ggacctccaggtccccctggtgcccgtggtcaggctggtgtgatgggattccctggacct
aaaggtgctgctggagaacccggcaaagctggagagcgaggtgttcccggaccccctggc
gctgtgggtcccgctggcaaagacggagaggctggagctcagggagcccctggccctgct
ggccctgctggtgagagaggtgaacaaggccctgctggctcccccggattccagggtctc
cctggccccgctggtcctcccggtgaagcaggcaaacccggtgaacagggtgctcctgga
gacctcggtgcccctggcccctctggagcaagaggcgagagaggtttccctggagagcgt
ggtgtgcaaggtccccccggccctgctggtccccgcggatccaatggtgcccctggcaat
gatggtgctaagggtgatgctggtgcccctggagcccccggcagccagggtgcccctggc
cttcagggaatgcctggtgaacgaggtgcagctggtcttccaggcccaaagggtgacaga
ggcgatgctggtcccaaaggtgctgacggtgctcctggcaaagatggcgtccgaggcctg
actggccccatcggtcctcctggccctgctggtgcccctggtgacaagggtgaaacaggt
cctagcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgagcct
ggtccccctggccctgctggcttcgctggcccccctggtgctgatggccagcctggtgct
aaaggcgaacccggtgatgctggtgctaaaggcgatgctggtcccgctggccctgctggc
cccgccggcccccctggccccattggtaacgttggtgctcctggacccaaaggtgcccgc
ggcagcgctggtccccctggtgctactggtttccctggtgctgctggccgcgttggtccc
cccggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaaggc
ggcaaaggcccccgtggtgagaccggccccgctggacgtcccggtgaagtcggtccccct
ggcccccccggccctgctggcgagaaaggatcccctggctctgatggacctgctggctcc
cccggaacccctggacctcaaggcattgctggacagcgtggtgtggtcggcctgcccggt
cagcgaggagagcgaggcttccccggtcttcctggcccctctggtgaacctggcaaacaa
ggtccttctggctccagtggcgaacgtggcccccctggtcccatgggcccccctggattg
gctggaccccctggcgagtctggacgtgagggatcacctggtgctgagggctcccccgga
cgagatggatctcctggccccaagggtgaccgtggtgagaccggccctgctggaccccca
ggcgctcctggcgctcctggtgcccctggccctgtcggccctgctggcaagagtggcgac
cgtggtgagactggtcctgctggtcctgccggccccatcggccccgctggtgcccgtggc
cccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggcgacaga
ggcatcaagggtcaccgtggtttctccggcctccagggtccccctggccctcctggctct
cctggtgagcaaggtccctctggagcttctggtcccgctggtccccgtggtccccccggc
tctcccggtgctgctggcaaagatggtctcaatggtctcgccggccccatcggaccccct
ggtcctcgtggtcgcactggtgatgctggtcctgttggtccccccggccctcccggcccc
cctggtccccctggtcctcccagcggcggtttcgacttcagcttcatgccccagccgcct
caagagaaggcccacgatggtggccgctactaccgggccgatgatgccaatgtggtccgt
gaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatc
cggagccccgaaggcagccgcaagaaccccgcccgcacctgccgcgacctcaagatgtgc
cactccgactggaagagcggagaatactggattgaccccaaccaaggctgcaacctggac
gccatcaaggtcttctgcaacatggagaccggcgagacctgcgtgtaccccactcagccc
accgtggcccagaagaactggtacatcagcaagaaccccaaggagaagaagcacatctgg
ttcggcgagagcatgaccggcggattccagttcgagtatggcggccaggactccgacccc
gccgacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaac
ctcacctaccactgcaagaacagcgtggcctacctggaccagcagacaggcaacctcaag
aagtccctgctcctccagggctccaacgagatcgagctccggtccgagggcaacagccgt
ttcacctacactgtcacctacgacggctgcacgagtcataccggagcctggggcaagaca
gtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggcccccttg
gacattggcgccccagaccaggaattcggcatgaacgttggccctgtctgcttcctgtaa
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