Entry |
|
Symbol |
ALYREF
|
Name |
(RefSeq) THO complex subunit 4
|
KO |
|
Organism |
mdt Myotis daubentonii (Daubenton's bat)
|
Pathway |
mdt05168 | Herpes simplex virus 1 infection |
|
Brite |
KEGG Orthology (KO) [BR:mdt00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132219218 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
132219218 (ALYREF)
03015 mRNA surveillance pathway
132219218 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132219218 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132219218 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mdt03019]
132219218 (ALYREF)
03041 Spliceosome [BR:mdt03041]
132219218 (ALYREF)
Messenger RNA biogenesis [BR:mdt03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132219218 (ALYREF)
TREX complex
132219218 (ALYREF)
Spliceosome [BR:mdt03041]
Complex C
Other components
EJC/TREX
132219218 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132219218 (ALYREF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
16:complement(57128719..57132414)
|
AA seq |
434 aa
MPQFSSLATQSQVATPFQHLIFTLMAAGPAGEDETAAAEAAGRGRRGTRAPQSSARTRTP
AAAVGAQTNGRPTPSRREFTRETARGRGRREEAPPRPPAPAYLAARGAACLQLQPQRRAG
RSETTATAAGTSPRLPPSPDPSAHAPRPQPIAGRARDAAPEVTGRRADARARAEADSAPA
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGGPIRNRAA
LVRGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPVQSVNRGGMTRTRGSGGFGGTRRGARGGSRGRGRGTGRSSKQQISAEEL
DAQLDAYNARMDTS |
NT seq |
1305 nt +upstreamnt +downstreamnt
atgccgcagttctcgtcgttggccacccagagccaagtggccacgccgttccagcactta
atcttcaccctcatggcggcggggcctgcgggcgaggacgagaccgctgcggccgaggct
gcggggcgggggcgccgagggacccgggcgccgcagagctcggcgcgcactcggacccct
gcagcggccgtcggagcccaaacgaacggaagacccaccccttcccgcagggagttcacc
cgggaaacagcccgagggcggggtcgccgggaggaagccccgccccgcccgcccgccccg
gcgtatttagccgcgcgcggcgccgcctgcctacagttgcagccccagcgccgcgcggga
aggtccgaaacgaccgcgaccgcagccggcacctcgccgcgcctaccgcccagccccgac
cccagcgcgcacgcgccgcgcccgcagccaatcgccggccgcgcccgggacgccgcgccg
gaagtgacgggccggcgtgctgacgcgcgggctcgagccgaggccgattccgcgcccgcc
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcgg
ggcggccgcggcgggggccggggccggggccgggccggctcccagggaggacgcggtggc
ggagcgcaggccgccgcacgagtgagccggggcggcgggcccatccggaaccgggcggcc
ctcgtccgcggcgcggcgggcggcggaggcaggaaccggccggcgccctacagccggccg
aagcagcttcccgacaagtggcaacacgaccttttcgacagcggcttcggcgggggcgcc
ggcgtggagacgggggggaagctgctggtgtccaacctggacttcggagtgtccgacgcg
gacatccaggagctgtttgcggagttcgggacgctgaagaaggctgccgtgcactacgac
cgctctggccgcagcctggggaccgccgacgtgcactttgagcggaaggcagacgccctg
aaagccatgaagcagtacaacggcgtccccttggatggccgccccatgaacatccagctg
gtcacctcacagatagacacgcagcgcaggccggtacagagtgtgaacagaggcgggatg
actagaacccgagggtctggaggcttcggtggcactcggagaggcgcccgtggaggcagc
cggggcagaggcaggggcaccggccggagttcaaagcagcagatctctgcggaggagctg
gatgcccagctggacgcttacaacgcgaggatggacaccagctaa |