KEGG   Myotis daubentonii (Daubenton's bat): 132219218
Entry
132219218         CDS       T10294                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
mdt  Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013  Nucleocytoplasmic transport
mdt03015  mRNA surveillance pathway
mdt03040  Spliceosome
mdt05014  Amyotrophic lateral sclerosis
mdt05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mdt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132219218 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    132219218 (ALYREF)
   03015 mRNA surveillance pathway
    132219218 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132219218 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    132219218 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdt03019]
    132219218 (ALYREF)
   03041 Spliceosome [BR:mdt03041]
    132219218 (ALYREF)
Messenger RNA biogenesis [BR:mdt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     132219218 (ALYREF)
    TREX complex
     132219218 (ALYREF)
Spliceosome [BR:mdt03041]
 Complex C
  Other components
   EJC/TREX
    132219218 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    132219218 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 132219218
NCBI-ProteinID: XP_059527533
LinkDB
Position
16:complement(57128719..57132414)
AA seq 434 aa
MPQFSSLATQSQVATPFQHLIFTLMAAGPAGEDETAAAEAAGRGRRGTRAPQSSARTRTP
AAAVGAQTNGRPTPSRREFTRETARGRGRREEAPPRPPAPAYLAARGAACLQLQPQRRAG
RSETTATAAGTSPRLPPSPDPSAHAPRPQPIAGRARDAAPEVTGRRADARARAEADSAPA
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGGPIRNRAA
LVRGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPVQSVNRGGMTRTRGSGGFGGTRRGARGGSRGRGRGTGRSSKQQISAEEL
DAQLDAYNARMDTS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgccgcagttctcgtcgttggccacccagagccaagtggccacgccgttccagcactta
atcttcaccctcatggcggcggggcctgcgggcgaggacgagaccgctgcggccgaggct
gcggggcgggggcgccgagggacccgggcgccgcagagctcggcgcgcactcggacccct
gcagcggccgtcggagcccaaacgaacggaagacccaccccttcccgcagggagttcacc
cgggaaacagcccgagggcggggtcgccgggaggaagccccgccccgcccgcccgccccg
gcgtatttagccgcgcgcggcgccgcctgcctacagttgcagccccagcgccgcgcggga
aggtccgaaacgaccgcgaccgcagccggcacctcgccgcgcctaccgcccagccccgac
cccagcgcgcacgcgccgcgcccgcagccaatcgccggccgcgcccgggacgccgcgccg
gaagtgacgggccggcgtgctgacgcgcgggctcgagccgaggccgattccgcgcccgcc
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcgg
ggcggccgcggcgggggccggggccggggccgggccggctcccagggaggacgcggtggc
ggagcgcaggccgccgcacgagtgagccggggcggcgggcccatccggaaccgggcggcc
ctcgtccgcggcgcggcgggcggcggaggcaggaaccggccggcgccctacagccggccg
aagcagcttcccgacaagtggcaacacgaccttttcgacagcggcttcggcgggggcgcc
ggcgtggagacgggggggaagctgctggtgtccaacctggacttcggagtgtccgacgcg
gacatccaggagctgtttgcggagttcgggacgctgaagaaggctgccgtgcactacgac
cgctctggccgcagcctggggaccgccgacgtgcactttgagcggaaggcagacgccctg
aaagccatgaagcagtacaacggcgtccccttggatggccgccccatgaacatccagctg
gtcacctcacagatagacacgcagcgcaggccggtacagagtgtgaacagaggcgggatg
actagaacccgagggtctggaggcttcggtggcactcggagaggcgcccgtggaggcagc
cggggcagaggcaggggcaccggccggagttcaaagcagcagatctctgcggaggagctg
gatgcccagctggacgcttacaacgcgaggatggacaccagctaa

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