Myotis daubentonii (Daubenton's bat): 132219371
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Entry
132219371 CDS
T10294
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132219371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdt03021
]
132219371
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132219371
Transcription machinery [BR:
mdt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132219371
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
132219371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
132219371
NCBI-ProteinID:
XP_059527710
LinkDB
All DBs
Position
16:complement(8197961..8201549)
Genome browser
AA seq
1125 aa
AA seq
DB search
MSEPTLAEAGPLRAREDACRDYQSSLEDLTVNSKLHINMLTILAQENLHFAKDIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTTNLVATFIRVFEKVDKNTRKSLFKLRS
TWNEIFPLKILRALDVRVNSLDPAWPVQPLPPNQNTSSIHVTSTFLNKSPEEPSAGKMCH
SGCKQSHMEDFVPPSREERNAKRSAEQDVRDPKRIKKTEDERPQENKSLQQGEDHSKSPH
LRRRESWSSAKGVVSPRAPKQQHRLSVDANLQVFTELTLASKRELLQKTSEHLASGEITQ
DEYLVVAPQIRQLFQYQKGVREEQRSPFNDRFPLKRPRCEDAGEPFVDTSASRLAGLDTN
QRLTVLAEDRPLFDEPSRPSVTRDGPTKMIFEGPNKLSPRIDGPSAPGFLRLDGSPGQMG
AGGPLRFEGPPGPEGTPLRFEGPVGQAGRGGFRLEGSPGLRFEGPHGQPVGGLRFDNPGG
QPIRGHRFEGGRGPSGPAIRFDGPHGQPEGGIRFEGPLLQHGVGIRFEGPHGQSVAGLRF
EGQHNQLGGNLRFQGPHGQPGFGIRFEGPLVRQGGGMRFDGPVPGGGLRLEGPLGQGGPR
LEGWHAFRFDGQPGQPSLLPRFDGLHGQLGPRFERTGQPGSQRFDGPPGQQVQPRFDGVP
QRLDGPQHQQASRFGVPLGLQGTRFDNHPSQRLESVSFRQTGPYSEPPGNAFNAPSQGLQ
FPRHEQIFDSPQGPNFNGLRGPGNQSFSNPLSRASGHSFDEKNLQSPQCGNFGSLPAQIT
AGNMQVSQQVLTGVAQPVPFGQGQQFLPVHPKNPGAFVQNPSGALPKAYPDHHLSQADAN
ELFSKLLRTGILKLSQPDSATAQVNEVAAQPPTEEKEGQNEDRDVPDLTNFTMEELKQRY
DSVINQLHTGIQCYSCGMRFTTSQADVYADHLDWHYRQNRTKKDVSRKVTHRRWYYSSTD
WIEFEEIADLEERAKSQFLEKAHEEVVLNTQQAAKEKQSQSVPAGPAGAVESCEICQDQF
EQYWDDEEEEWHLKNAIRVDGKICHPSCYEDDQNTSSFDCTSSPSKMPVENPLNIMLNIV
RNELQEPCESTNVKEEQIDTPPACTEDSIATSQKIKTEDDIVESV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcccaccctggccgaggccggtcccttgagggcccgggaggacgcctgtcgg
gattatcagtcatccctcgaagacctgaccgtcaatagcaaactgcacatcaatatgctg
accattctagcccaggagaacctgcacttcgccaaggatatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcccgttatgtaccttatggattctatc
gtgaaaaacgttggccgagagtatctcaccgcctttactacaaatctagttgcaacattt
attcgtgtgtttgaaaaggtggataaaaataccagaaaaagtctatttaaattacgttcg
acatggaatgagatattcccattgaagattcttcgtgccctggatgtcagagtcaattca
ttagatcctgcttggcctgttcaacctctaccccccaatcagaatacatctagcatccat
gtgacttctacatttctaaataaatcgcctgaagagccttcagctggaaagatgtgccac
tctggatgtaagcagtcacatatggaagactttgtgccaccttccagggaagaaagaaat
gctaagagaagtgctgaacaagatgttcgagatccaaagcgaataaagaagactgaagac
gaacgaccacaagaaaataaaagcttacaacaaggtgaggaccatagtaaatctcctcat
ctaaggcggagggaaagctggtcgagcgctaaaggggttgtgtcacctcgagccccaaag
caacagcatcgattaagcgtagatgccaatcttcaggttttcacagagttaactctcgca
agcaaaagagaattacttcaaaagacgagtgaacatttagcatctggtgaaattacacag
gatgagtaccttgttgttgcgcctcaaattcgacagctatttcagtatcaaaaaggtgta
cgagaagagcagaggtcaccattcaatgatcgttttccacttaagcgacctagatgtgaa
gatgcaggtgaaccatttgtagatacctcagcatcacgactcgccggcctagatacaaat
cagcgccttacagtgttagctgaagacagaccgttatttgatgaacctagtaggccatcg
gtaacaagagatggcccgaccaagatgatttttgaaggacctaataaattaagccctagg
attgatggaccttctgcaccaggttttcttcgattggatgggtcacctggacaaatgggg
gccggtggtcctttgagatttgaaggtcctccgggaccagaagggacacctctgaggttt
gaagggccagttggtcaagcaggcagaggtggttttcggttggaaggttcccctggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatcccggaggt
cagcctatacgtggacatagatttgaggggggtcgtggtccatcaggacctgcaattagg
tttgatggacctcatggtcagccagaaggtgggatcagatttgagggccctttgctacag
cacggagttggaataaggtttgagggcccccatggccagtcagtcgctggcctgaggttt
gaaggacaacataatcaacttggtggaaaccttaggtttcagggtccacatggtcaacca
gggtttgggatcaggtttgagggacctttagtccgacaaggaggtggaatgaggtttgac
ggtcctgtaccaggaggtggactgagacttgaagggcctctgggtcaaggtggtccaaga
ttggaaggttggcatgctttcaggtttgatgggcagccaggtcagccatcactcttacca
agatttgatggattacatggccaactaggtcctagatttgaaagaactggtcagccaggc
tcacagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgttcct
caaagacttgatggtccacaacaccagcaagcatcaaggtttggtgttccccttggtctt
caaggcacacgatttgacaatcatccttcacaaaggcttgaatccgtttcgttccgtcag
actggtccatatagtgagccacctggcaatgcttttaatgccccatcccaaggactgcaa
ttcccaagacacgaacaaatatttgattcacctcaaggacccaattttaatggactgcgt
ggccctggaaaccagagtttctcaaatccccttagcagagcttctggacactcttttgat
gaaaagaatcttcaaagtcctcaatgtggaaactttggcagtttacctgctcagataaca
gcgggaaacatgcaggtgtctcaacaggttctcactggtgttgctcagccagtaccgttt
ggccagggacaacaatttttaccagttcatccaaaaaatcctggagcatttgttcagaat
ccttccggagcccttcctaaggcatatcctgatcatcacctcagtcaggcggatgccaat
gaattattttcaaaactgctaagaacaggaattctcaaattgtcccagcctgattcagct
acagcacaagtaaatgaagttgctgctcagcctcccactgaagagaaggaaggtcaaaat
gaagatcgagatgttcccgatcttaccaattttacaatggaagagttaaaacaacgttat
gatagtgttataaatcaactgcacactggtattcagtgttactcttgtggaatgaggttt
acaacgtcacaggcagatgtatatgcagatcacttggactggcattatcggcaaaataga
actaaaaaagacgttagcagaaaagttactcatagacgttggtactacagttcaacagac
tggatagagtttgaggaaatagctgatttggaagaacgggcaaagagccagtttcttgaa
aaggcgcatgaagaagttgtgctcaatactcagcaagctgctaaggaaaagcagtcccaa
agtgtaccggcagggccagctggagcagtggagagttgtgaaatctgtcaagaccaattt
gaacaatactgggatgacgaagaggaggagtggcatttaaagaatgccatcagagtggat
ggaaagatttgtcatccatcatgttatgaagatgatcaaaatacatcttcatttgattgt
acatcatctcccagcaagatgccagttgaaaaccctctgaatattatgttgaacattgtc
agaaatgaattgcaggaaccctgtgaaagtaccaatgttaaggaagaacaaattgatacc
ccaccagcttgtacagaggacagcatagcaacatctcagaaaattaaaacggaagatgat
atagttgagtcagtttaa
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