Myotis daubentonii (Daubenton's bat): 132220410
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Entry
132220410 CDS
T10294
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04151
PI3K-Akt signaling pathway
mdt04510
Focal adhesion
mdt04512
ECM-receptor interaction
mdt04518
Integrin signaling
mdt05165
Human papillomavirus infection
mdt05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132220410 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132220410 (TNR)
04518 Integrin signaling
132220410 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132220410 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132220410 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
132220410 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdt00536
]
132220410 (TNR)
Glycosaminoglycan binding proteins [BR:
mdt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132220410 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
EGF_2
Fn3_VIN3
FN3_Tor_3rd
DUF7949
Uroplakin_II
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
132220410
NCBI-ProteinID:
XP_059529446
LinkDB
All DBs
Position
18:24616712..24674873
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AA seq
1359 aa
AA seq
DB search
MGADGETVVLKNMLLGVNLILLGLMLKPTECQLEVPTERGQRPAVEEEGGIASYNTSDKE
PPVVFNHVYNINVPLDSLCSSGLEASAEQEVSAEDEAPAEYLGQTSDPESQVTVTHRINL
PRKGCPCAAGSAQVLRELLSRIEMLEREVSVLRDQCGGSCCQESAATGQLDYLPHCSGHG
NFSLESCGCICNEGWFGKNCSEPSCPLGCSSRGVCVDGQCICDSEYSGEDCSELRCRTDC
SSRGLCVDGECVCEEPYTGEDCSELRCPGDCSGKGSCANGTCVCQEGYVGEDCGQRHCLN
ACSGRGHCQEGLCFCKEGYQGPDCSAAAPPEDLRVAGISDRSIELEWDGPMAVTEYVISY
QPTALGGLQLQQRVPGDWRGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQ
GLQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEE
YLVNVVALKEQARSLPISASVATVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYG
LVGGEGGKTTFRLQPPLSQYSVQALRPGSRYQVSVSAVRGTNESEASTTQFTTEIDAPKN
LRVGSRTATSLDLEWDNSEAEVRKYKVVYSTLAGEQYHELLVPKSVGPTSRATLTDLIPG
TEYGFGISAVMDSQQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRIT
FTPSSGIASEVTVPKDRTWYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISH
LHFSHVTSSSVNITWSDPSPPADRLILNYSPRDKEEEMTEVSLDATKRHAVLMGLQPATE
YIVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVVVSWSPPVASFDYYRVSYR
PTQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERVCTLMHTAMDNPVDL
IATNITPTGALLQWKAPVGEVESYVIVLTRFSVAGETILVDGDSEEFLLTDLLPRTHYTI
SMHATSGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEVEKYVLTYKSTD
GSRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDAERSSLTSTAFTTGGRVFPHPQDCA
QHLMNGDTLSGVYTIFLHGEPGQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRA
GFGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAHYDKFSVEDSRSLYKLRVGG
YNGTAGDSLSYHQGRPFSTADRDNDIAVTNCALSYKGAWWYKNCHRTNLNGKYGESRHSQ
GINWYHWKGHEFSIPFVEMKTRPYNHRPLAGRKRRSLHF
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgacggggaaactgtggtcctgaagaatatgctccttggcgtcaacctgatt
cttctgggcttgatgctcaagcccacagagtgtcagctagaggttcccacggagaggggc
cagagaccggcggtggaggaggagggaggcattgccagctacaacacatccgacaaagag
ccgcccgtggtcttcaaccacgtgtacaacatcaacgtgcccctggacagcctctgctcc
tcggggctggaggcctcggccgagcaggaggtgagtgcggaagacgaggcaccggccgag
tatctgggccagacctccgacccggagagccaggtcaccgtcacccacaggatcaacctc
cccagaaagggctgcccgtgcgccgccggctcggcccaggtcctgcgggagctgctgagc
cgcatcgagatgctggagagggaggtgtcggtgcttcgggaccagtgcggcggcagctgc
tgccaagaaagtgcagccacaggacaactggactacctccctcactgcagtggccacggc
aacttcagcctcgagtcctgcggctgcatctgcaatgaaggttggtttggcaagaactgc
tcagagccctcctgccccctgggctgctccagtcggggcgtgtgtgtggatggccagtgc
atctgtgacagcgaatacagtggcgaggactgctccgaactccggtgccgcaccgactgc
agctcccgggggctctgtgtggacggggagtgtgtctgtgaggagccctacactggcgag
gactgcagcgagctgaggtgccccggggactgctccgggaaggggagctgtgccaatggg
acctgtgtgtgccaggagggctatgtgggcgaggactgtggccagcggcactgtctgaat
gcctgcagcgggcgaggacactgccaggagggactctgcttctgcaaagagggctaccag
ggccccgactgctcggcagctgcccctccagaggacttgcgagtggctggtatcagcgac
aggtccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttac
cagccgacggccctggggggcctccagctccagcagcgggtgcctggagattggcgtggt
gtcaccatcacagagctggagccaggtctcacctacaacatcagcgtctatgctgtcatt
agcaacatcctcagccttcccatcactgccaaggtggccacccatctctccactcctcaa
gggctgcagttcaagaccatcacagagaccaccgtggaggtgcagtgggagcccttctcc
ttctccttcgacgggtgggagatcagctttattccaaagaataatgaaggaggggtcatt
gcccagctccccagcgatgtcacatccttcaaccagactggactaaagcctggggaggag
taccttgtcaacgtggtggccctgaaggagcaagcccggagcctccccatctcggccagc
gtggccaccgtcattgacgggcccacgcagatcctggtgcgagatgtctccgacaccgtg
gccttcgtggagtggactccccctcgagccaaagtcgatttcatcctcctgaagtacggc
ctggtgggcggggaaggcgggaagaccaccttccggctgcagcctcccctgagccagtac
tcagtgcaggccctgcggcccggctcccgctaccaggtgagcgtcagtgccgtccgtggg
accaatgagagcgaggcctccaccacccagttcacgacagagattgatgcccccaagaac
ctgcgggttggctcccgcacagccaccagcctggacctcgagtgggacaacagtgaggcg
gaggttcggaagtacaaggttgtgtacagcaccctggcaggcgagcagtaccacgagctg
ctggtccccaagagcgttgggccaaccagcagagccaccctcaccgatctgatacccggc
actgagtacggatttggaatatctgctgtcatggactcacagcaaagcataccagccacc
atgaacgccaggacagaacttgacagtccgagagaccttatggtgacagcctcctctgag
acctccatctccctcatctggaccaaggccagtggccctattgaccactaccgaattacc
tttaccccatcctctgggatcgcctcagaagtcactgtgcccaaggacaggacctggtac
acactgaccgatctagagcctggggcagagtacatcatttccatcaccgctgagaggggt
cggcagcagagcttggagtccaccgtggatgccttcacaggcttccgccccatctcgcat
ttgcacttttctcacgtgacctcctccagcgtgaacatcacctggagtgacccatcccct
ccagcagacagactcatcctgaactacagcccccgggataaggaggaagagatgacggag
gtctccctggatgccaccaagaggcacgctgtcctgatgggcctgcagccggccaccgag
tacatcgtgaacctggtggccgtccacggcacagtgacctctgagcccatcgtgggctcc
atcaccacaggaattgatccccccaaagacatcacaattagcaatgtgaccaaggactca
gttgtggtctcctggagccctcctgtcgcatcttttgattactaccgagtatcataccgg
ccaacccaagtggggcggctggacagctcagtggtgcccaacactgtgacagaattcacc
atcaccaagttgtacccagctaccgaatacgaaatcagccttaacagcgtgcggggcagg
gaggagagtgagcgtgtctgcactctcatgcacacagccatggacaaccctgtggatctg
attgctaccaacatcactccgacgggagccctgctgcagtggaaggcacctgtgggcgaa
gtggagagctacgtcattgtcctcacacgcttctcagttgctggagagaccatcctggtt
gatggagacagtgaggagttcctgctcactgacctgctccctcgcacccactacactatc
agcatgcatgctaccagcgggcctctcaccagtggcaccatcagcaccaacttctccaca
ctactggaccctcctgcaaacctgactgccagtgaggtcaccagacagagtgccctgatc
tcctggcagcctcccagagccgaggtcgagaagtacgtcctgacctacaaatccactgac
ggaagccgcaaggagctgatcgtggatgcagaggacacgtggatccggttggaaggcctg
tctgagagcacagactacacagtgctcctgcaggcggcccaggatgccgagaggagcagc
ctcacctccaccgccttcaccacagggggccgggtgttccctcaccctcaagactgtgcc
cagcacctgatgaatggcgacactctgagtggggtctataccatcttcctccacggagag
cccggccagaagctccaggtgtactgcgacatgaccacggacgggggtggctggattgtg
ttccagaggcggcagaacggccagaccgactttttccggaagtgggcggagtaccgcgct
ggcttcgggaacctggaggacgagttttggctggggctggacaacatacacaggatcaca
tcccagggccgctacgagctgcgcgtggacatgcgcgacggccaggaggctgccttcgcc
cactatgacaagttctcggtcgaggacagcaggagcctgtacaagctccgtgtaggcggc
tacaacggcactgcaggggactccctcagctaccaccagggacgccccttctccactgcg
gacagagacaacgacatcgccgttaccaactgcgccctgtcctacaagggggcgtggtgg
tataagaactgccaccggaccaacctcaacgggaagtacggggagtccaggcacagccag
ggcatcaactggtaccactggaaaggccacgagttctccatccccttcgtggaaatgaag
acgcgcccctacaaccaccggcccctggcggggaggaagcggcggtccttgcacttctga
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integrated database retrieval system
