Myotis daubentonii (Daubenton's bat): 132220942
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Entry
132220942 CDS
T10294
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdt03000
]
132220942 (RC3H1)
04121 Ubiquitin system [BR:
mdt04121
]
132220942 (RC3H1)
Transcription factors [BR:
mdt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
132220942 (RC3H1)
Ubiquitin system [BR:
mdt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132220942 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
132220942
NCBI-ProteinID:
XP_059530677
LinkDB
All DBs
Position
18:25335872..25408137
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AA seq
1125 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYDEARKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLGPRRPLSASMGQLNEVGLPSAAILPDE
GAVDLPSRKPPSLPNGIVSAGNTVTQLIPRGTDPNYDSTLKPGKMDHLSNSAPGSPPDLL
ESVPKSIPHPVPPRVPSDLPPMPVTKPMQMVPRGSQLYPAQQADVYYQDPRGAAPPFEPA
PYQQGVYYTAPPCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQQYPPMYP
PHYDGRRVYPAQSYPREEIFRESPIPIEIPPAAVPSYIPESRERYQQVEGYYPVAPHPTQ
IRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFH
QEELLDEELKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSVEMMNVESKG
MRDQRLDHQRRATDTSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQGAPTK
SINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPSADREQLR
LELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAAQSQPPPPPPKWPGMISSEQLSLE
LHQVEREIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQAKVPTEDLTLTFSDVPN
GSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccggaaggcttgcccatttgaccagaccactatcaataccgac
attgagctccttcccgtgaactcagcgttgcttcagctagtgggtgctcaggtccctgag
cagcagcccgttacattgtgtagtggggttgaagatacaaagcattatgacgaagccagg
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagcgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaattagtggaagaagaaggcaggattcgtgccatgcgagcagctcgatcg
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tctaatctttgggcagcagtcagggctcggggctgccagttccttggaccagcaatgcag
gaggaagctcttaagttggttctcctggctttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttagagccacggttccctcaagcctctaaaact
agcattgggcatgttgtccagctcctgtatagagcctcctgcttcaaggtcaccaaacgt
gatgaagattcctctttgatgcaactgaaagaagaattcaggacctatgaagctctgcgg
cgagagcatgactcccagatagttcagattgctatggaagcaggcttacgaatcgcacca
gaccagtggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagactccagcctcttttgcacaaagtgtccaggaactaacaattgct
ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatgga
ctggttgctgtgcgtacagtggtacatgggctggttgattacatccagaaccacagtaag
aaaggagcagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctgggtcccagaagacccctgagt
gcctctatgggtcagcttaatgaggtgggcctgccttcagcagctatccttcctgacgaa
ggtgcggttgatctgccgagcagaaaacccccttctctgcccaatgggattgtgtcagca
gggaacacagtaactcagctgattccacgaggaacagaccccaactacgattctactctg
aaaccaggaaagatggatcatctgagcaacagtgcccctggatcccctcctgacctgcta
gaatctgtccccaagagtattccacatcctgtacctccaagggtgccatcagacctgcct
cccatgcctgtcactaaaccaatgcagatggtaccgcggggttcgcagttatatcccgcc
cagcaggcagacgtgtattatcaggatcctcgaggagccgcgccaccatttgaaccagca
ccttatcagcagggtgtgtactacactgcgccaccgtgtgtgtcccgctttgtccgaccg
ccaccatctgctcctgagcctggtcctccctacttggatcattacccaccctacctccaa
gatcgtgttgtaaactctcaatatggcacacagccacaacagtacccacctatgtaccca
ccacactatgatggccgtcgagtataccctgctcaatcttatccaagagaggagattttc
cgagaaagtcctatacccattgagattccacctgcagcagtaccatcctatataccagaa
tccagagaaagataccaacaggtggagggttactatccagtggctcctcatccaactcag
atcagaccttcgtacatcagagagcctccttatagccggcttcctcctcctccccagccc
caccctagtctagatgagctacatcgaagacgaaaggaaataatggcccaactagaggaa
aggaaggttatctctccacctccttttgcaccttcaccaacattgccacctaccttccat
caagaggaattattggatgaagaattgaaggtagctgggaaatataaaggaaatgattat
agccaatactctccctggtcatgtgacaccatcggctcctacattggaaccaaagatgca
aaacccaaagatgctgtggcagcagggagtgtggaaatgatgaatgtggagagtaaagga
atgagagaccagcggttggatcatcagagaagagcaacagacaccagtgatgatgacctc
atcccatttggagaccgaccaacagtatctcgatttggtgccatctctcgaacttccaaa
acaatatatcagggtgctggcccaatgcaggctatggcacctcagggagctcccacaaaa
tctattaatatttcagattacagtccatatggaacccatggtggctggggaggttctccc
tactcacctcatcaaaacataccttctcagggacacttcagtgaaagggagagaatatcc
atgtcagaagtggccagtcatggcaaaccccttccatctgctgacagggaacagctacga
ctagaattgcagcagctaaaccatcaaattagccaacagacccagctacgtggactagag
gctgttagtaacaggctggtgttgcagagggaggtgaacaccctggcagctcagtcacag
ccaccaccaccacctccaaaatggcctggaatgatctcaagtgagcagttgagcttggaa
ctgcaccaggtggaaagggaaatcgggaagagaacccgggaactgagtttggagaaccag
tgttctctggatatgaaaagcaaattgaatacaagtaagcaagcagaaaatggacaacca
gaaccacaagctaaggttccaaccgaggatcttacattgacattcagtgatgtgccgaat
gggtcagccttgacacaagagaatatcagcctcctatcaaacaagaccagctctctgaac
ctatcagaggaccctgaaggaggaggagacaacaatgactcccagagatcaggagttaca
cccagttctgctccctaa
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integrated database retrieval system
