Myotis daubentonii (Daubenton's bat): 132221843
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Entry
132221843 CDS
T10294
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt05014
Amyotrophic lateral sclerosis
mdt05017
Spinocerebellar ataxia
mdt05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132221843 (ATXN2)
05017 Spinocerebellar ataxia
132221843 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
132221843 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132221843 (ATXN2)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132221843 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
132221843
NCBI-ProteinID:
XP_059532310
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All DBs
Position
19:10917186..11014019
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AA seq
1165 aa
AA seq
DB search
MSLKPQQQQQPSAAANARKPGGGGLLTSPAAPPSSPSVSSSTPASSSSSSAAAAASAGSG
RPGLGRGRNNNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYS
PKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRVASETDAF
TDSAISAKVNGEHKEKDLEPWDAGELTASEELEALENDVSNGWDPNDMFRYNEENYGVVS
TYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTA
VQRNSSERESHSINTRENKYIPPGQRNREVMSWGSGRQNSPRMGQPGPGSMASRSTSHTS
DFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPS
RPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHT
PPSEAVAPPTARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAG
IIPTEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPNETSP
SFSKVENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESVDQLLNKNREGEKSRDLIK
DKIEPNAKDSFIENNSSNCTSGSSKPSSPSVSPSILSHTEHRRGPEVTSQGVQTSSPGCK
PEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQ
PTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQH
HQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQ
GSARMMAPAAHAQPGLVSSSAAQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQ
QYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLAGPQQQS
AIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHV
QSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCR
GRRAPQAFCSHRSNGRQSQRFKPCI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcagcagcagcagccgtccgcggccgccaatgcccgcaagccc
ggtggcggcggccttctcacgtcgcccgccgccccgccgtcctcgccctcggtctcgtcc
tcgaccccggcttcctcctcctcctcctcggcggcggcggcggcgagcgcaggcagcggg
cggcccggcctgggcagaggtcgaaacaataacaagggactgcctcagtctacgatttct
tttgatggaatctatgcaaatatgaggatggttcatatacttacatcagttgttggatcc
aaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacatacagt
cctaagtgtgatttggtccttgatgctgcacatgagaaaagtacagaatccagttcaggg
ccaaagcgtgaagaaataatggagagtattttgtttaagtgttcagacttcgttgtggta
caatttaaagatatggactccagttatgcaagaagagttgcttcagaaacagatgctttt
actgactcagctatcagtgctaaagtgaacggtgagcacaaagagaaggacctggagccc
tgggatgctggggagctcactgccagtgaggagctcgaagctttggaaaacgacgtctct
aatggatgggatcccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtct
acatatgatagcagtttatcttcatataccgtgcccttagaaagggataattcagaagaa
tttttaaaacgagaagcaagagcaaaccaattagcagaagaaattgaatcaagtgcccag
tacaaagcccgggtagccctggaaaatgatgataggagcgaagaagaaaaatacacagca
gttcagagaaattccagtgaacgcgagagtcacagcatcaacactagggaaaataaatat
attcctcctggacaaagaaatagagaagtcatgtcctggggaagtgggcgacagaattca
ccgcgtatgggccagcctggaccgggctccatggcatcaagatccacttctcacacatca
gatttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccctggcca
tcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaactct
cttccacctcgggcagccacccctacacggccgccctccaggcccccctcgcggccatcc
agacccccgtctcacccctctgctcatggttctccagctcctgtctctactatgcctaaa
cgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcgacaccctcgaaat
cacagagtttctgctggaaggggttccatttccagtggactagaatttgtatcccatact
ccaccgagtgaagcagtggctcctcccacagcaaggaccagtccagcggggggcacgtgg
tcatctgtggtcagcggggttccaagattatcccccaaaactcacagacccaggtctccc
agacagaacagtattggaaatactcctagtggaccagttcttgcttctccccaagctggt
attattcccacggaagctgttgctatgcctgttccagctgcatctcccacgcctgccagt
cctgcatctaacagagctgtcaccccgtctattgaggctaaggattccaggcttcaagat
cagaggcagaactctcctgcagggaataaggaaaacatgaagcccaatgagacatcaccc
agcttctcaaaagttgaaaataaaggtatatcaccagttgtttccgagcatagaaaacag
attgatgacttaaagaaatttaagaatgattttaggttacagccaagttctacttctgaa
tctgtggatcaactgctaaacaaaaatagagagggagaaaaatcaagagatttgatcaaa
gacaaaattgaaccaaatgctaaggattctttcattgaaaataacagcagcaactgcacc
agtggcagcagcaagccgagcagccccagcgtttccccctcgatcctcagtcacacggag
cacaggaggggtcctgaggtcacctcccaaggagtgcagacgtccagccccggatgtaaa
ccagagaaagatgataaagaggagaaaaaagacgcagctgagcaagtgaggaaatcaaca
ttgaatcccaacgcaaaggaattcaaccctcgttctttttctcagccaaagccttctacc
accccaacttcgcctcgccctcaagcacaacctagcccatccatggtgggtcatcagcag
ccaactccagtttatactcagcctgtttgttttgcaccaaatatgatgtatccagtccca
gtgagcccaggcgtgcaaccattataccctatacctatgacgcccatgccagtgaatcag
gccaagacatatagagcaggtaaagtaccaaatatgccccagcaacggcaagaccagcat
catcagagcaccatgatgcatcccgcctcagcggcaggcccgccaattgtggccacccca
ccagcgtattccacacagtacgttgcctatagtcctcagcagtttccaaatcagcctctt
gttcagcacgtgccccattatcagtctcagcaccctcatgtctacagccctgtgatacag
ggcagtgccaggatgatggccccagcggcccacgcccagccgggcctcgtgtcttcctca
gctgctcagtacggggctcacgagcagacacatgcgatgtatgcatgtcccaaattacca
tacaacaaggagacaagcccttctttctactttgccatttccactggctcccttgctcag
cagtatgcgcaccctaatgctaccctgcacccacatactccacatcctcagccttcagcc
acccccactggacagcagcaaagccaacatggtggaagtcaccctgcacccagtcccgtc
cagcaccatcagcaccaagccgcccaggctctccacctggcgggtccgcagcagcagtca
gccatttaccacgcggggctcgcaccaaccccgccgtccatgacacctgcttccaacacg
cagtcgccacagaacagtttcccagcagcacagcagacagtcttcacaatccacccttct
cacgtccagccggcatacaccaacccgccccacatggcccacgtacctcaggctcatgta
cagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatgacgaca
cagccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtc
tcgacaacagcgcatttcccctatatgacgcacccttcaggtgaggcgtgtgtgtgcagg
ggccgccgggcaccccaagcattctgctcgcacaggtcgaatggcaggcagagccagcgc
ttcaaaccctgcatttga
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