Myotis daubentonii (Daubenton's bat): 132221843
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Entry
132221843 CDS
T10294
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin-2
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt05014
Amyotrophic lateral sclerosis
mdt05017
Spinocerebellar ataxia
mdt05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132221843 (ATXN2)
05017 Spinocerebellar ataxia
132221843 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
132221843 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132221843 (ATXN2)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132221843 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
132221843
NCBI-ProteinID:
XP_059532310
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All DBs
Position
19:10917186..11014019
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AA seq
1165 aa
AA seq
DB search
MSLKPQQQQQPSAAANARKPGGGGLLTSPAAPPSSPSVSSSTPASSSSSSAAAAASAGSG
RPGLGRGRNNNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYS
PKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRVASETDAF
TDSAISAKVNGEHKEKDLEPWDAGELTASEELEALENDVSNGWDPNDMFRYNEENYGVVS
TYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTA
VQRNSSERESHSINTRENKYIPPGQRNREVMSWGSGRQNSPRMGQPGPGSMASRSTSHTS
DFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPS
RPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHT
PPSEAVAPPTARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAG
IIPTEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPNETSP
SFSKVENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESVDQLLNKNREGEKSRDLIK
DKIEPNAKDSFIENNSSNCTSGSSKPSSPSVSPSILSHTEHRRGPEVTSQGVQTSSPGCK
PEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQ
PTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQH
HQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQ
GSARMMAPAAHAQPGLVSSSAAQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQ
QYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLAGPQQQS
AIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHV
QSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCR
GRRAPQAFCSHRSNGRQSQRFKPCI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcagcagcagcagccgtccgcggccgccaatgcccgcaagccc
ggtggcggcggccttctcacgtcgcccgccgccccgccgtcctcgccctcggtctcgtcc
tcgaccccggcttcctcctcctcctcctcggcggcggcggcggcgagcgcaggcagcggg
cggcccggcctgggcagaggtcgaaacaataacaagggactgcctcagtctacgatttct
tttgatggaatctatgcaaatatgaggatggttcatatacttacatcagttgttggatcc
aaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacatacagt
cctaagtgtgatttggtccttgatgctgcacatgagaaaagtacagaatccagttcaggg
ccaaagcgtgaagaaataatggagagtattttgtttaagtgttcagacttcgttgtggta
caatttaaagatatggactccagttatgcaagaagagttgcttcagaaacagatgctttt
actgactcagctatcagtgctaaagtgaacggtgagcacaaagagaaggacctggagccc
tgggatgctggggagctcactgccagtgaggagctcgaagctttggaaaacgacgtctct
aatggatgggatcccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtct
acatatgatagcagtttatcttcatataccgtgcccttagaaagggataattcagaagaa
tttttaaaacgagaagcaagagcaaaccaattagcagaagaaattgaatcaagtgcccag
tacaaagcccgggtagccctggaaaatgatgataggagcgaagaagaaaaatacacagca
gttcagagaaattccagtgaacgcgagagtcacagcatcaacactagggaaaataaatat
attcctcctggacaaagaaatagagaagtcatgtcctggggaagtgggcgacagaattca
ccgcgtatgggccagcctggaccgggctccatggcatcaagatccacttctcacacatca
gatttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccctggcca
tcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaactct
cttccacctcgggcagccacccctacacggccgccctccaggcccccctcgcggccatcc
agacccccgtctcacccctctgctcatggttctccagctcctgtctctactatgcctaaa
cgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcgacaccctcgaaat
cacagagtttctgctggaaggggttccatttccagtggactagaatttgtatcccatact
ccaccgagtgaagcagtggctcctcccacagcaaggaccagtccagcggggggcacgtgg
tcatctgtggtcagcggggttccaagattatcccccaaaactcacagacccaggtctccc
agacagaacagtattggaaatactcctagtggaccagttcttgcttctccccaagctggt
attattcccacggaagctgttgctatgcctgttccagctgcatctcccacgcctgccagt
cctgcatctaacagagctgtcaccccgtctattgaggctaaggattccaggcttcaagat
cagaggcagaactctcctgcagggaataaggaaaacatgaagcccaatgagacatcaccc
agcttctcaaaagttgaaaataaaggtatatcaccagttgtttccgagcatagaaaacag
attgatgacttaaagaaatttaagaatgattttaggttacagccaagttctacttctgaa
tctgtggatcaactgctaaacaaaaatagagagggagaaaaatcaagagatttgatcaaa
gacaaaattgaaccaaatgctaaggattctttcattgaaaataacagcagcaactgcacc
agtggcagcagcaagccgagcagccccagcgtttccccctcgatcctcagtcacacggag
cacaggaggggtcctgaggtcacctcccaaggagtgcagacgtccagccccggatgtaaa
ccagagaaagatgataaagaggagaaaaaagacgcagctgagcaagtgaggaaatcaaca
ttgaatcccaacgcaaaggaattcaaccctcgttctttttctcagccaaagccttctacc
accccaacttcgcctcgccctcaagcacaacctagcccatccatggtgggtcatcagcag
ccaactccagtttatactcagcctgtttgttttgcaccaaatatgatgtatccagtccca
gtgagcccaggcgtgcaaccattataccctatacctatgacgcccatgccagtgaatcag
gccaagacatatagagcaggtaaagtaccaaatatgccccagcaacggcaagaccagcat
catcagagcaccatgatgcatcccgcctcagcggcaggcccgccaattgtggccacccca
ccagcgtattccacacagtacgttgcctatagtcctcagcagtttccaaatcagcctctt
gttcagcacgtgccccattatcagtctcagcaccctcatgtctacagccctgtgatacag
ggcagtgccaggatgatggccccagcggcccacgcccagccgggcctcgtgtcttcctca
gctgctcagtacggggctcacgagcagacacatgcgatgtatgcatgtcccaaattacca
tacaacaaggagacaagcccttctttctactttgccatttccactggctcccttgctcag
cagtatgcgcaccctaatgctaccctgcacccacatactccacatcctcagccttcagcc
acccccactggacagcagcaaagccaacatggtggaagtcaccctgcacccagtcccgtc
cagcaccatcagcaccaagccgcccaggctctccacctggcgggtccgcagcagcagtca
gccatttaccacgcggggctcgcaccaaccccgccgtccatgacacctgcttccaacacg
cagtcgccacagaacagtttcccagcagcacagcagacagtcttcacaatccacccttct
cacgtccagccggcatacaccaacccgccccacatggcccacgtacctcaggctcatgta
cagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatgacgaca
cagccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtc
tcgacaacagcgcatttcccctatatgacgcacccttcaggtgaggcgtgtgtgtgcagg
ggccgccgggcaccccaagcattctgctcgcacaggtcgaatggcaggcagagccagcgc
ttcaaaccctgcatttga
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