Myotis daubentonii (Daubenton's bat): 132222033
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Entry
132222033 CDS
T10294
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt05016
Huntington disease
mdt05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
132222033 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
132222033 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132222033 (HTT)
04131 Membrane trafficking [BR:
mdt04131
]
132222033 (HTT)
03029 Mitochondrial biogenesis [BR:
mdt03029
]
132222033 (HTT)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132222033 (HTT)
Membrane trafficking [BR:
mdt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132222033 (HTT)
Mitochondrial biogenesis [BR:
mdt03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132222033 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
132222033
NCBI-ProteinID:
XP_059532788
LinkDB
All DBs
Position
1:complement(232495442..232598303)
Genome browser
AA seq
3128 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQPPPPPPPPQAQPPPPQPQPQPPPPPPPGPAVAEE
PLHRPKKELSATKKDRVNHCLTICESIVGQSLRNSPEFQKLLGIAMELFLLCSDDAESDV
RMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCR
PYLVNLLPCLTRTSKRPEESVQETLAAAIPKIMASLGNFANDNEIKVLLKAFITNLKSSS
PTTRRTAAACVVSICQHSRRTQYFYSWLLSVLLGLLVPIEGEHPSLLVLGALLTLRYLVP
LLQQQVQDTSLKGSFGVTRKEMDVSPSTEQLVQVYELTLHYAQHPDHNVVTGALELLQQL
LRTPPPELLRALTTPGGLAQLSAPRQEPGSRSRSGSIVELIAGGGSSCSPVLSRKQKGKV
LLGEAAALEEDSESRSEGSSPAFAASVKGEICGELAASSGVSTPGSVSSAADSTGHDIIT
EQPRSQHTLQPDSVDLTGCDLASAATDGDEEDILSHSSSQISAVPSDPAMDLNDGTQASS
PLSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQDAGMQLPPPEEEEEEEEEAEEEPTGLP
EDAVAFAAASAALQQAHLLKSMGHSRQPSDSSVDRGVSREDAADPGDQDNKPCRIRGDIG
QPDDDDSAPLTHCVRLLSASFLLTGERNALVPDRDVRVSVKALALSCVGAAVALCPESFF
SKLYTAPLDAAECPEEQYVSDVLSYIDHGDPQVRGATAILCGTLICSILSRSRFQVGDWL
GSVRARTGNTFSLVDCVPLLRKTLKDESSVTCKLACTAVRHCVMSLCSSSYSDLGLQLIT
DVLSLRSSSYWLVRTELLETLAETDFRLVSFLEAKAEHLHRGAHHYTGLLKLQERVLHSV
VLHLLGDEDPRVRHVAAASLVRLVPKLFYKCDQGQADPVVAMARDQSSVYLKLLMHEAQP
ASHFSVSTITRIYRGYNLLPSITDVTMENNLSRVTAAVTHQLVTATTRALTFGCCEALCL
LSTAFPVCTWSLGWHCGVPPLSALDESRKSCTVGMATVILTLLSSAWFPLDLAAHQDALI
LAGNLLAASAPRSLRSSWAAEEEATPAAGKQEEAWPALGDRSLVPMVEQLFSHLLKVINI
CAHVLDEVAPGPAGKAALPSLTSAPALSPIRRKGKEKEPSEQASVPLSPKKSSDASPASR
QSDATGPVTANKPSSLGSFYHLPSYLRLHDVLKATHANYKVTLDLQNSTEKFGGFLRSAL
DVLSQILELATLQDIGKCVEEVLGYLRSCFSREPTMATVCVQQLLKTLFGTNLASQFDGL
SSNPSKCQGRAQRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEPDHDASGWF
DVLQKVSTQLKTNLSSITKTRADKNAIHSHIRLFEPLVIKALKQYTTTTSVQLQRQVLDL
LAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFLVLLSYERYHS
KQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVV
VSMLLRLIQYHQVLEMLILVLQQCHKESEDRWKRLSRQVADILLPMLAKQQMHIDSHEAL
GVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWVSGILAILRVLISQSTEDI
VLSRIQELAFSPHLLSCPVINRLRDGDRDSAPDGHSAGRQVKALPEETFSRFLLQLVGIL
LEDIVTKQLRVDMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTADGADGS
FYGLESLNAQVRSMVPTHPALVLLWCQILLLVNHTDYGWWAEVQQTPRRRSLSSTKSLSP
QMSGEEDTELASKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLVVNHIQDLISLSH
EPPVQDFVSAVHRNPAASGLFLQAVQSRCESLSAPTTLRKTLQCLEGIHLSQSGAVLTLY
VDKLLCTPFRALARMVDTLACRRVEMLLAANLQSSVAQLPVEELNRIQEHLQSRGLAHRH
QRLYSLLDRLRLATAPASRGPCPLATSHPLDGEGSLALETVSPDKDWYVRLVKSQCWMRS
DSALLEGAELVNRLPPGDMSAFLRHPEFNLSLLAPCLGVGAREVSGGQKSALFEAAREAT
LDRVAGAVQPLPAAHQAFPPSLPAESTAYWSQLSDLFGDAGVYRSLTTLARALAQYLLLL
PKLPGHLHLPPEKERDTVKFVVMTLEALAWHLIHEQIPLSMDLQAGLDCCCLALQLPGLR
RLLASPEMVTRTCSLIHCVRLLLEAIVVQPGDQLLGVERKTGTPKAAREDGGDSRTQSPE
HVTAACRTVAELVEALPSVLALGHKRNSHMPAFLTSVLRNIVVSLARLPLVNSYTRIPPL
VWKLGWSPTPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGV
LVTQPLVLEQEESPPEEDTERTQINVLAVQAITSLVLSAMAVPVAGNPALSCLEQQPRNK
PLKALDTRFGRKLSLIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPAATGALISH
DKLLLQTNPERELGSMSYQLGQVSIHSVWLGSSITPLREEEWDEEEEEEADVPAPPSPPT
SPVSSRKHRAGVDIHSCSQFLLELYSRWVLPSSSGRRTPIILISEVVRSLLVVSDLFTER
SQFEMMYQTLTELRRVHPPEDEILLQYLVPATCKAAAVLGMDKAVAEPVGRLLESTLRSS
HLPSRIGALHGALYVLECDLLDDTAKQLIPVISDYLLSNLRSSAHCVNLHSQQHVLVMCA
TAFYLMENYPLDVGPDFSASIIQMCGVMLSGSEEATPSTVYHCVLRGLERLLLSEQLSRL
DAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKASPGRASEPGPAAPDSESVIVA
MERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMAT
VVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTSPWVSAILP
HVVSRMGKLEHVDVNLFCLVATDFYRHQVEEELDRRAFQSVFEVVAAPGNPYQRLLACLR
NVHKVATC
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggagaagctgatgaaggccttcgagtccctcaagtccttccagcagcag
cagcaacagcagcagcagccgccgccgcctccgccaccgccacaggctcagccgcccccg
ccgcagccccagccgcagccgccgcccccgccgccgcccggcccggccgtggccgaggag
ccgctgcaccgtccaaagaaggagctctcggccaccaagaaggaccgcgtgaaccattgt
ctgaccatctgtgagagcatcgtgggccagtcgctcagaaattctcccgagtttcagaaa
ctgctgggcatcgccatggagctgttcctgctgtgcagcgacgacgcggagtcggacgtg
aggatggtggctgacgagtgcctcaacaaggtcatcaaggcgctgatggattctaacctc
ccgaggctgcagctcgagctctacaaggaaatcaagaagaacggcgctccccggagcctg
cgtgctgccctgtggaggttcgccgagctggcgcacctggtccggccccagaaatgcagg
ccttacttggtgaacctcctgccttgcctgacgcgaacaagcaagagacctgaggagtct
gttcaggagaccttggctgcagctatacccaaaattatggcttcgctcggcaattttgca
aatgacaatgagattaaggttctgctgaaggctttcatcacgaacctgaagtccagctcc
ccgaccacgcggcggacggcggcggcctgcgtggtgagcatctgccagcactcccggagg
acgcagtacttctacagctggctgctcagcgtgctcctagggttgctggttcccatcgag
ggtgagcacccgtcgctgctggtcctgggagcgctgctcacactgcggtacttggtgccc
ttgctgcagcagcaggtccaggacaccagcctgaaaggcagctttggggtgacacgaaag
gaaatggacgtctccccctcgacagagcagctggtgcaggtttacgagctgacgttgcat
tacgcccagcacccggaccacaatgtggtgaccggggcgctggagctcctgcagcagctg
ctccggaccccgccccccgagctgctgcgcgccctgaccacgccgggcggcctggcgcag
ctcagcgcgccccgccaggagcccggcagccgcagccgcagcgggagcatcgtggagctg
atagccggagggggttcttcatgcagccctgtcctttccagaaaacaaaaagggaaggtg
ctcctgggggaagcggcggccttggaggaggactccgagtcccggtcggagggcagcagc
ccggccttcgcagcctcagtcaagggcgagatctgtggggagctggctgcctcttccggg
gtctccactccgggctctgtcagctccgcggctgactccacgggtcatgacatcatcacc
gagcagccccggtcacagcacacgctacagccggactcggtggatctgaccggctgcgac
ttggcgagtgcggccactgacggggacgaggaggatatcttaagccacagctccagccag
atcagcgcggtcccgtccgacccggccatggacctgaacgatgggacccaggcctcctcc
ccgctcagcgacagctctcagaccaccaccgaggggcccgactcagccgtgaccccttca
gacagctccgaaatcgtgttagacggcgccgacagccaggacgcggggatgcagctccca
ccgccggaggaggaggaggaggaggaagaggaggcggaggaggagcccacgggccttcct
gaagacgccgtcgcctttgcagctgcatcggcagcccttcagcaagcacatttactgaaa
agcatgggccacagcaggcagccctcggacagcagtgtggacaggggtgtgtccagagag
gacgccgccgacccaggggatcaggacaacaagccctgccgcatcagaggggacattggg
cagcctgacgacgacgactctgcgcccctcacccattgtgtccgcctcttgtctgcttcg
tttctgctcacgggggagagaaacgccttggttcccgacagggacgtgcgtgtcagcgtg
aaggcgctggcgctcagctgtgtcggcgctgcggtggccctgtgcccggagtccttcttc
agcaagctgtacacagcccccctggacgccgccgagtgtccggaggagcagtacgtctcg
gacgtcctcagctacatcgatcacggagacccgcaggtccgcggagccacggccatcctc
tgcgggactctcatctgctccatcctcagcaggtcccgcttccaggtgggggactggctg
ggctccgttcgagctcgcacaggaaacacattttctctggtggactgcgttcctttgctg
cggaaaacgctgaaggatgagtcatctgttacttgcaagttggcgtgtacagctgtgcgg
cactgtgtcatgagcctctgtagcagcagctacagcgacctggggctgcagctgatcacc
gacgtgctgagcctgaggagcagctcctactggctggtgaggacggagctgctggagaca
ctcgcagagacggacttcaggttggtgagctttttggaagcaaaagccgagcacctgcac
agaggggcgcaccattacacagggcttttgaagctgcaagagcgggtgctccacagcgtg
gtcctccacctgctgggggatgaagaccccagagtgcgacacgttgccgccgcgtcgtta
gtgaggcttgtccccaagctgttctataagtgcgaccaagggcaggcggaccccgtcgtg
gccatggccagagaccagagcagtgtttacctgaagcttctcatgcacgaggcgcagccc
gcctcccacttctccgtcagcaccataaccagaatatatagaggctataacttactgcca
agcatcacagatgtcaccatggaaaacaacctgtccagagtcactgcggccgtgacccac
cagctggtcactgccaccacgcgcgcgctcacgttcggatgctgtgaagctctgtgtctc
ctctcaaccgccttcccggtctgcacttggagtctaggctggcactgtggagtgccccct
ctgagcgccttggacgagtccaggaagagctgtactgtcgggatggccacggtgatcctg
accctgctctcatccgcgtggttcccgttggaccttgcagcccatcaggatgccttgatc
ttggccggaaacttgcttgcagccagtgccccccgatcgctgagaagctcatgggccgcc
gaggaggaggccaccccggcagccggcaagcaggaggaggcgtggccagcgctgggggac
cggagcctggtgcccatggtggagcagctcttctcccacctgctgaaggtgatcaacatc
tgcgcccacgtgctggacgaggtggcgcctggacccgcggggaaggcagccttgccgtcc
ctgacaagcgcccctgctctcagccccattcggcggaagggcaaggagaaggagccgagc
gagcaggcgtccgtgccgctgagccccaagaaaagcagcgatgccagccccgcctctcga
cagtcagatgccacagggcccgtcacagccaataaaccctcgtcgctggggagcttctac
caccttccttcctacctcaggctgcacgacgtcctgaaggccacacacgccaactacaag
gtcaccctggaccttcagaacagcacggagaagttcgggggctttctgcgctcggccttg
gatgtgctctctcagatcctagagctggccacgctgcaggacatcgggaagtgcgtggag
gaggtcctgggctacctgaggtcctgcttcagccgggagcccacgatggccacggtctgc
gtccagcagctgctcaagactctctttgggacaaacctggcctcccagtttgatggcttg
tcgtccaaccccagcaagtgccagggccgagcccagcgcctcggctcgtccagcctgcgg
cccggcctgtaccactactgcttcatggctccctacacccacttcacccaggccctggcg
gacgccagcctgcgcaacatggtgcaggccgagccggaccacgacgcctccgggtggttc
gacgtgctgcagaaggtgtccacccagctgaagacaaacctctcgagcatcacaaagacc
cgtgcagacaagaacgccattcacagtcacatccggctgttcgagccgctggtcataaag
gcgctgaagcagtacacgaccaccacgtccgtgcagctgcagaggcaggtgctggacttg
ctggcgcagctggtgcagctgcgggtcaactactgtctcctggactcggaccaggtgttc
atcgggttcgtgctgaagcagtttgagtacattgaagtgggccagttcagggactcagag
gcaatcattccgaacatctttttcttcctggtccttctgtcttacgagcgctatcattca
aagcagatcatcgggatccctaagatcattcagctctgtgacggcatcatggcgagcggg
aggaaagccgtgacccacgccatcccggctctgcagcccatcgtccacgacctcttcgtt
ctaagagggaccaataaagctgacgcggggaaggagctggaaacccagaaggaggtggtg
gtgtccatgctcctcagacttatccagtaccaccaggtgctggagatgctgatcctggtc
ctgcagcagtgccacaaggagagcgaggaccggtggaagcggctgtcgcggcaggtggcc
gacatcctcctcccgatgctcgccaagcagcagatgcacatcgattctcacgaagccctc
ggcgtgttaaacacgttgtttgagatcctggccccgtcctccctgcggcccgtggacatg
cttttgcggagcatgttcgtcaccccagacaccatggcgtcggtgagcactgtccagctc
tgggtctcggggatcctggccattttgagggtcctcatctcccagtccacggaagacatc
gtcctctcccgcatccaggagctggccttctccccgcacctgctctcctgtcccgtcatc
aacaggctaagggacggggacagggactcagcacccgatggacacagcgcgggcagacag
gtgaaggctttgccggaagagacgttctctaggttcctcctgcagctggtgggcatcctc
ttagaggacatcgtcacgaagcagctcagagtggacatgagcgagcagcagcacactttc
tactgccaggaactgggcacgctcctcatgtgtctgatccacatcttcaagtctggaatg
ttccggagaatcacagcagccgcctccaggctcttcacggccgacggcgcggacggcagc
ttctacggcctggagagcttgaacgcgcaggtgcgctccatggtccccacacacccggcc
ctcgtgctgctctggtgccagatcctgctgctcgtcaaccacacggactacggctggtgg
gccgaggtgcaacagacccccagacgacgcagtctgtccagcacgaagtcactgagtccc
cagatgtctggagaggaggacaccgagctggcatccaaacttgggatgtgcaacagagaa
attgtccggcgaggtgcgctcatcctcttctgtgattacgtgtgtcagaacctgcacgac
tccgagcacctgacctggctcgtcgtgaaccacatccaggacctgatcagcctgtcgcac
gagccgcccgtgcaggacttcgtcagcgccgtgcaccgcaaccccgccgccagcggcctc
ttcctccaggccgtccagtcccgctgcgagagcctctcggcccccaccacactgaggaag
accctgcagtgcctggaaggcatccacctgagccagtcgggcgccgtgctgacgctgtac
gtggacaagctgctgtgtaccccgttccgcgcgctggctcgcatggtcgacacccttgcg
tgtcgccgggtagaaatgcttttggctgcaaatttacagagtagcgtggcccagctgccc
gtggaagaactgaacaggatccaggagcaccttcagagccgcgggctcgctcacaggcac
caaaggctctactccctgctggacaggctccgcctcgccaccgccccggcgtcccggggc
ccctgtcctctggccacgtcccacccactggatggggaagggtccctggcgctggagact
gtgagcccagacaaggactggtacgtgcgcctggtcaagtcccagtgctggatgaggtct
gactcggcgctgctggagggggcggagctggtgaatcggctcccaccaggtgacatgagc
gcgttcctgaggcacccggagttcaacctcagcctgttagccccgtgcctgggcgtgggc
gcgcgggaagtttccggaggccagaagagcgccctctttgaagcagcgcgcgaggcgact
ctggaccgggtggccggcgcggtccagccgctgcccgccgcccaccaggcgttcccgccc
tccctgcctgcagagtccaccgcctactggagccagttgagcgatctgtttggggatgcc
ggggtgtaccgctccctgaccacgctggcccgcgccctggcccagtacctgctgctgctc
cccaagctgcccggccacctgcaccttcccccagagaaggagagggacactgtgaagttt
gtggtcatgaccctggaggcactggcctggcacttgatccacgagcagatcccgctgagt
atggacctgcaggcgggcctggactgctgctgcctggccctgcagctgcccggcctgcgg
cgcctgctggcctcccccgagatggtgacccgcacctgctccctcatccactgcgtccgc
ctcctcctggaagccattgtggtgcagcctggggaccagctgctcggtgtagagagaaag
acaggcaccccgaaggctgccagagaggacggaggagactcacgcacacagagccccgag
cacgtgactgcagcctgcaggacggtggcagagctggtggaggccttgccgtccgtgctg
gccttggggcataagaggaacagccacatgcccgcgttcctcacgtccgtgctcaggaac
atcgtggtcagcctggcccgcttgcccctcgtcaacagctacacgcgcatcccccccctg
gtctggaagctcgggtggtcacccacgccgggaggggatttcggcacagccttccccgag
atccccgtggagttcctccaggagaaggaagtcttcaaagagttcatctaccgcatcaac
acgctggggtggaccagccgcactcagttcgaggaaacatgggccaccctcctgggcgtc
ctggtgacccagcccctcgtgctggagcaggaggagagccccccggaggaagacacggag
aggacccagatcaacgtcctggctgtgcaggccatcacctccctggtgctgagcgcgatg
gccgtgcccgtggccggcaaccccgccctcagctgcttggagcagcagccccggaacaag
cccctgaaagcactcgacaccaggtttgggcggaagctgagcctgatccgaggaattgta
gagcaggaaatccaagcaatggtgtcgaagagggagaacatcgccacccatcacctctac
caggcgtgggaccccgtcccctctctgtctccggccgccacaggtgccctcatcagccac
gacaagctgctgctgcagaccaaccccgagcgggagctgggcagcatgagctaccagctc
ggccaggtgtccatccactcggtgtggctggggagcagcatcacgcccctgagggaggag
gagtgggacgaggaggaggaggaggaggccgacgtccccgcacccccgtcgccgcccacg
tctccagtcagctccaggaagcaccgggctggggtggacatccactcgtgctcgcagttc
ttgctggagctgtacagccgctgggtcctgccgtccagttccggccgaaggacccccatc
atcctgatcagcgaagtggtgcgatctctcctcgtggtctcagacctgttcacggagcgc
agccagtttgagatgatgtaccagacgctgaccgagctgcgcagggtgcaccctccagag
gacgagatcctcctgcagtacctggtgccggccacctgcaaggcggcggccgtcctcggc
atggacaaggccgtggcggagcccgtcggccggctgttggagagcacgctcaggagcagc
cacctgcccagcaggatcggggccctgcacggcgccctctacgtgctggagtgcgacctg
ctggacgacacggcgaagcagctcatccccgtcatcagcgactacctcctttccaacctc
cgcagcagcgcccactgcgtgaacctgcacagccagcagcacgtgctggtgatgtgtgcc
accgccttctacctgatggagaactaccctctggacgtggggccggacttctccgcatcc
atcatacagatgtgtggggtgatgctgtcgggaagcgaggaggccacgccgtccaccgtc
taccactgcgtcctgcggggcctggagcgcctcctgctgtccgagcagctgtcccggctg
gatgccgagtccctggtcaagctcagcgtggacagggtgaacgtgcacagcccgcatcgg
gccatggccgccctgggcctgatgctcacctgcatgtacacagggaaggaaaaagccagt
cccggcagagcctccgagcccggccctgccgcgcccgacagcgagtccgtgatcgtggcc
atggagcgcgtgtctgttcttttcgacaggatcaggaaggggtttccctgtgaagcccgc
gttgtggcgaggatcctccctcagtttttagatgacttcttccctccgcaagacgtcatg
aacaaagtcatcggggagttcctgtccaaccagcagccctacccgcagttcatggccacc
gtggtgtacaaggttttccagacgctgcacagcacggggcagtcgtccatggtccgggac
tgggtcatgctgtccctctccaacttcacgcagaggaccccggtggccatggccgtgtgg
agcctgtcctgcttcttcgtcagcgcgtccaccagcccgtgggtctcagccatcctgccc
cacgtcgtcagcaggatgggcaagctggagcacgtggacgtcaacctcttctgcctggtg
gccacggacttttacagacaccaggtagaggaggagctggaccgccgggccttccagtct
gtgttcgaggtggtggcggcgccaggaaacccgtaccagcggctgctggcatgtttgcgg
aacgttcacaaggtcgccacgtgctga
DBGET
integrated database retrieval system
