Myotis daubentonii (Daubenton's bat): 132223501
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Entry
132223501 CDS
T10294
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03008
Ribosome biogenesis in eukaryotes
mdt03013
Nucleocytoplasmic transport
mdt03015
mRNA surveillance pathway
mdt05014
Amyotrophic lateral sclerosis
mdt05164
Influenza A
mdt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132223501
03015 mRNA surveillance pathway
132223501
03008 Ribosome biogenesis in eukaryotes
132223501
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
132223501
05168 Herpes simplex virus 1 infection
132223501
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132223501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132223501
03009 Ribosome biogenesis [BR:
mdt03009
]
132223501
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132223501
mRNA cycle factors
Stress granule specific factors
132223501
Ribosome biogenesis [BR:
mdt03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132223501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
LRR_9
Thioredoxin_11
Motif
Other DBs
NCBI-GeneID:
132223501
NCBI-ProteinID:
XP_059534637
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Position
X:complement(57468699..57486380)
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AA seq
576 aa
AA seq
DB search
MWENKGWDFSIILGKLHYEYGSYEHQPXHLQEDDGNKAMRGSQKDPSNMTIKAYQNRTPE
RQMENRQDGNLGDWFKVTVPYGIKYDKTWLMNSIQSHCSVPFTPVDFHYVKHLAQFFVQD
ASAASALKDINNKIFDEENQKIPIFVNTSAVPYSMSNKLEPEKMEQLKLTISKRYDVSQK
VLDLYKLRFDPDLLGHDIIIILNRRNCMAAILQTIKKNIPELLSLNLCKNKLCQLDGLSD
IIQIAPTIKTLNLSKNELKSAKELDKIKGLKLEELWLQGNPLCNTFPNQPTYISAIRKYF
PNLLRLDGQDLPPPTVTGIVNMDIIKPCKESFKGPETLKNLVFQFLLHYYLIYDSEDRES
LLSAYHEEACFSLTVPFNSEDPALSNLCEYLKDNRNMKNVKDSDLRFQLLKHTKCEIVNS
LCVFPKTQHDLNSYVVDLWAHTEIMLCFSVSGVFKEVEGKSQGSVHAFTRTFILSSGTNS
SMCIVNDILTVGNARTEETQSAFSIPVPTPTFSSLSTLSQEQQEMVQIFSIQSGISLQWS
QKCLQDNEWNYIKAAQVFTTLKTQGKIPEEAFKQTS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaaataaaggttgggatttttccatcattttggggaaacttcattatgaatat
ggtagttatgagcatcaacctnttcaccttcaggaggatgatggaaacaaggcaatgagg
ggttcccagaaggacccctcaaatatgacaattaaagcataccaaaatagaactccagaa
agacaaatggaaaacagacaggatggaaaccttggggactggttcaaggtcacagtccct
tatgggataaaatatgacaagacatggctaatgaattcaatccaaagccattgcagtgtc
cccttcactccagtggatttccactatgttaaacacctggcccagttctttgtccaggat
gctagtgctgcctctgcattgaaggacataaacaacaagatttttgatgaggagaaccaa
aagatacctatctttgttaatacttctgctgtaccctactctatgagcaataaattggag
ccagaaaaaatggaacagctaaagctgaccataagcaaacgatatgacgtttcccagaaa
gttcttgacctttataagctccgctttgacccagacttactgggccatgatattattata
atcctgaatcgaagaaactgcatggctgccatcctgcagaccatcaaaaagaatatccct
gagctgttgtccttgaacttatgtaagaacaaactgtgccagctggatggcctgtccgat
attatacagattgcccccacaatcaagaccctgaacctttcaaaaaatgagctaaagtca
gccaaggagttggacaagataaaagggctgaagcttgaagagctgtggctgcaagggaac
cccttgtgcaataccttcccaaaccagcccacttacataagcgccatcaggaaatatttc
cccaacttgttacgcttggatggccaggatttacctccaccaactgtaactggcattgta
aacatggacataataaaaccctgtaaggaaagctttaaaggacctgagaccctgaagaat
ctagtctttcaattcctgcttcactattacttgatttatgattctgaagaccgagagagt
ctcctcagcgcttaccacgaggaggcctgcttctccctgactgttcccttcaactctgaa
gacccagccctaagcaacttgtgcgagtacttaaaagataacaggaatatgaagaacgtc
aaggattctgacctgcggtttcagctactgaagcatacaaagtgtgagattgtgaactcc
ctctgtgtgttccccaaaactcagcatgaccttaactcctatgtggtagacctgtgggcc
cacacggaaattatgctctgtttttctgtcagtggggttttcaaggaagtggaaggaaag
tctcaaggttctgtccatgccttcacccggaccttcatcttgtcttctggcaccaattcc
agtatgtgcatcgtgaatgatatattgactgtggggaatgccaggacagaagaaacccag
agtgcattctccattccagtacctacacccaccttcagctccctatctaccctctcccag
gagcagcaagaaatggtgcagattttctccatccagtctgggataagcctccagtggtct
cagaagtgccttcaggacaatgagtggaactacatcaaagctgctcaggtattcactacg
ctcaagacccagggcaagatcccagaagaggccttcaaacaaacctcttaa
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