Myotis daubentonii (Daubenton's bat): 132227464
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Entry
132227464 CDS
T10294
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdt04121
]
132227464 (PDZRN4)
Enzymes [BR:
mdt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132227464 (PDZRN4)
Ubiquitin system [BR:
mdt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132227464 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
PDZ_Tricorn
IBR_1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
132227464
NCBI-ProteinID:
XP_059538566
LinkDB
All DBs
Position
2:43387881..43739546
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AA seq
1037 aa
AA seq
DB search
MGFALERFAAAAGAELECGLCGRLLDEPLCTPCGHVFCASCLLPWAARRRRCPLQCQPLA
PGELYRVLPLRSLLRQLRLQGDPRASGGGGRSVRPHEREAPAARGDFGAARRGGCVSGPG
GRGGEDVPARGGGGAAPGAGRGGGARGGLPGGCCGSGSGRGPGPRVLAWRRREQALLAQL
GALQGEVQLAARRYRDKFAQYMAHVRNFARDLGGGHGPGGEHKPFTILLERENDTLGFNI
IGGRPNQNDQEEISREGIYVSKILKNGPADRAEGLEIHDKIIEVNGKDLSKATHEEAVEA
FRNAKEPIVVQVLRRTPLSKPIYGAAPEVQLMNASTQTDITFEHIMALAKLRPPTPPVPD
ICPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTV
CYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECRR
IVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEQHNEAMQHTANEVEQPKKQEEEEGT
TDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPKSTSLKSKRELGQSQDTLGSV
ELQCNESFVSGEYIDSDCPGNQDEECERFRQLLELKCKIQNHGEYDLYYSSSTIECNQGE
QEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQR
GKLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRTTMAA
SQSSPGQSSKESSSTKAKAPEGCGTEGKEKISESNKLSDQEKTGSEHIPYLSPYHSSSYR
HANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESPKCAEPKMEWKVKIRSDGTR
YITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRR
REFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAK
SPDGTRVHNAFLSVTTV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgccctggagcgcttcgccgcagccgctggcgcggagctggagtgcgggctg
tgcggccggctgctggacgagcccctgtgcacgccgtgcgggcacgtcttctgcgccagc
tgcctgctgccctgggcggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
cccggcgagctgtaccgggtgctgcctctgcgcagcctcctccgccagctgcgcctccag
ggcgatccccgcgccagtggcggcggcggccgctcggtccggccgcacgagcgggaggcg
cccgccgcgcgcggggacttcggcgcggcccgccgcgggggctgcgtctcggggccgggc
ggccgcggcggcgaggacgtgcccgcgcgggggggcggcggcgcggcgcccggggccggc
cggggcgggggcgcgcgcggggggctgccgggcggctgctgcgggagcgggagcgggcgg
gggcccgggccacgagtgctcgcctggaggcggcgcgagcaggcgctgctggcgcagctc
ggggcgctgcagggcgaggtgcagctggcggcccgcaggtaccgggacaagttcgcccag
tacatggctcacgtccgcaacttcgccagggacctgggcggcggccacggcccgggtgga
gaacataagccattcaccattctattagaacgagaaaatgacactttgggattcaacatt
ataggagggcgaccaaatcagaatgatcaagaagaaatatcaagagaaggaatttatgtt
tcaaaaattttgaaaaatggacctgctgacagagcagaaggcttggagattcatgacaaa
atcattgaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagct
tttcgaaatgccaaggagcccattgtggttcaggtgctaaggcgaacgccactcagtaaa
ccaatctatggagcggccccggaagtgcagctcatgaacgccagtactcagacggacatc
acctttgagcacatcatggccctggctaagcttaggccacctacccctccggtgccggac
atctgtccatttctgctctcagacagctgccattctcttcacccgatggagcatgaattt
tatgaggacaatgagtatctctccagcttgcctgctgatgcagacagaacagaggacttt
gaatatgaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggcctgacagtc
tgttaccgcacggatgatgaagaagacaccggcatttatgtcagcgaggtagatccaaat
agtattgctgccaaagatggccggattcgagaaggggatcgtattttgcaaataaatggg
gaagatgtccagaatcgagaagaagcagtggcgttgctctccagcgacgagtgcaggaga
atcgtgctgctcgtggcgaggccggagattcagctggacgaaggctggctggaagatgaa
aggaacgaattcttagaggagttaaacttggagatgctggaagaacagcataatgaagca
atgcagcacactgccaatgaggtggagcagccaaaaaaacaagaagaagaagaaggcaca
acagacacggccacatcctcatccaacaaccatgagaaggacagtggagtggggcgcacg
gatgaaagcttgcggaacgatgagagctcagagcaggagaatgcggctgaggatcccaaa
agcacatctttgaagagcaagagagagctggggcagagccaggacaccctggggagcgtg
gaactccagtgcaatgagagctttgtgtcaggtgaatacattgactcggactgccctggc
aaccaagatgaggagtgtgagcgattccggcagctcttggagctcaaatgcaagattcaa
aaccatggagagtatgacctgtattactcgagcagcacaatagaatgcaaccaaggggaa
caagagggagtggagcatgagctacagttgctgaacgaagaactaagaaacattgaactt
gagtgccagaatatcatgcaagctcataggctccagaaggtaacagaccagtacggagac
atctgggcattgcatgatggaggattccgaaattataacaccagcatcgatatgcaaaga
ggaaaactagatgacatcattgagcacccagagaagtcagacaaggacagttctagtgct
tacaacacagccgaaagctgcaggagcacgccgctcaccgtggaccgttcccctgacagc
tcccttcccagaatgatcaacctcaccaataagaaaaacctgagaaccacaatggcagcc
agccagtcctctcctggacagagcagtaaagagtcgagctccaccaaagccaaagcccct
gaaggttgtggcactgaaggcaaggagaagatctcagaaagcaacaagctttctgatcaa
gagaagaccggcagcgaacacatcccttacctctctccttaccacagctcctcatacagg
catgcaaacataccagcccacgcccggcattatcaaagctacatgcagctaattcaacag
aaatctgccgtcgagtatgcacagagtcagctgagtctggtgagcatgtgcaaggagtcc
ccgaagtgtgcggaacccaagatggaatggaaggtgaaaatcaggagcgatgggacccgg
tacatcacaaagagaccagtgcgagaccggattctgaaggagcgtgccttaaagatcaag
gaggagcggagtggcatgacgacggatgatgacactatgagcgagatgaaaatgggtcgc
tactggagcaaagaggaaagaaagcaacacctggttcgggccaaagagcagcgtcggcgc
cgagagttcatgatgcggagccggttagagtgtctcaaggagagccctcagagcggcagc
gagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatgaagaagaga
aacaagaaaattttggacaactggatgacaatccaagaactgatgacccatggggccaag
tctccggatggcacgcgagttcataatgcctttttgtcagtcaccactgtatga
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