Myotis daubentonii (Daubenton's bat): 132227506
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Entry
132227506 CDS
T10294
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04151
PI3K-Akt signaling pathway
mdt04510
Focal adhesion
mdt04512
ECM-receptor interaction
mdt04974
Protein digestion and absorption
mdt05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132227506 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132227506 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132227506 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132227506 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132227506 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdt00536
]
132227506 (COL2A1)
Glycosaminoglycan binding proteins [BR:
mdt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132227506 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
132227506
NCBI-ProteinID:
XP_059538667
LinkDB
All DBs
Position
2:complement(49004351..49034837)
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AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICATDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKLGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPSGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDVEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgcgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtcctctgcgacgacataatctgtgaagatatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgcgcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgccggtgaacaaggacccagaggtgatcgtggcgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggccctcctggcccccctggcccccctggccttggtggaaactttgct
gcccagatggctggaggatttgatgagaaggctggtggcgcccagatgggagtaatgcaa
ggaccaatgggccccatgggaccgcgaggacctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggtgaacctggggaacccggcgtctctggtcccatgggt
ccccgtggtcctccgggcccccctggaaagcctggtgatgatggtgaagctggaaagcct
ggaaaatctggtgaaagaggccctcccggccctcagggtgctcgcggcttcccaggaacc
ccaggacttcctggtgtcaaaggtcacagaggttacccaggcctggatggtgctaagggc
gaagctggtgctccgggtgtgaagggcgagagtggctcccctggtgagaatggttctccg
ggccccatgggtccccgtggtctgcctggtgagagaggacggactggccctgcaggcgcc
gtgggtgcccggggcaacgatggtcaaccaggccctgcagggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggggctcccggtgccaagggtgaagctggtcccacc
ggtgctcgtggccctgaaggcgctcaaggtcctcgcggtgaacctggcactcctgggtcc
ccggggccggctggtgcctctggcaaccctggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcccggcttccctgggccccggggtcctcct
ggccctcaaggtgcaactggtcctttgggcccaaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagaaactggccctgccggcccccaggga
gcccccggtcccgctggtgaagagggcaaaagaggtgcgcgcggagagcccggtggcgcg
gggcccgtcggcccccccggagaaagaggcgctcctggcaaccgtggtttccctggtcaa
gacggcctggccggtcccaagggagcccctggcgagcgagggcccagcggcctcgctgga
cccaagggagccaacggtgaccctggccgtcccggagagcctggccttcctggagctcgg
ggtctcactggccgtcctggtgatgctggtcctcaaggcaaacttggtccttctggagcc
cccggtgaagacggtcgccccgggcctcccgggccgcagggggctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaacggcgagcctggcaaagctggtgagaaa
ggactgcccggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggcgct
gcaggcccccctggacccgcgggaccttcaggtgaacgaggcgagcagggtgctcccgga
ccatctggcttccaggggcttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggcgttcccggcgaagctggagcccccggcctcgtgggtcccagaggtgaa
cgaggtttcccaggtgaacgtggctctcctggtgcccagggcctccagggtccccgtggc
ctccccggcactcccggcaccgatggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcagggcatgcccggtgagaggggagcagctggtatt
tctgggcccaagggagacaggggtgatgttggtgagaaaggcccagagggagcccctggg
aaggacggtggacgaggtctgacaggtcccattggccctcctggcccggcgggtgccaac
ggtgagaagggagaagttggccctcctggtcctgcgggaactgctggtgctcgaggtgcc
ccgggtgaacgtggagagaccggacctcccggacccgctggattcgctggtcctcccggt
gctgatggccagccaggcgccaagggtgagcaaggagaggccggccagaaaggcgacgct
ggcgccccagggccgcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccccgga
gctgctggccgcgtcggacccccaggctccaacggcaaccctggaccccctggtcccccc
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggcccccccggccga
gccggtgaccccggcctccaaggtcctgccggagcccctggcgagaagggagagcctgga
gatgacggtccctctggtcccgatggtcccccaggtccccagggtctggctggtcagagg
ggcatcgttggtctgcccggacagcgtggtgagagaggattccccggcctgcccggccca
tcgggcgagcctggcaagcagggagctcctggtgcatctggagaccgaggtccccctggc
cccgtgggcccccctgggctgactggtcctgctggtgaacccggacgagagggaagccct
ggcgccgacggcccccctggcagagatggtgcagctggagtcaagggcgatcgtggtgag
acgggtcccctgggtgctcctggagccccggggccccctggctctccgggccccgctggc
ccaaccggcaagcagggagaccgaggagaagctggcgcacaaggccctatgggccccgca
ggaccagctggagcccgtgggatcccaggccctcaaggcccccgaggcgacaaaggagag
actggagaggctggcgagaggggactgaagggacaccgtggcttcactggtctgcagggt
ctccccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtcggtccctctggcaaagatggctctaatggaatc
cctggccccattggacctcctggtccccgtggacgttctggcgaaacaggccccgctggt
cctcctggaaatcctggaccccctggccctccgggtccccccggccctggcattgacatg
tcagcctttgctggcttaggcgggagagaaaaaggccccgaccccatgcagtacatgcgg
gccgatcaggcagccggcaatctgaggcagcatgacgtggaggtggatgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccacccagaatggaagagcggagactactggatc
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
agcaaagacaagaaacatatctggtttggagaaaccatcaacggtggcttccacttcagc
tacggggatgacaacctggctcccaacactgccaacgtccagatgaccttcctgcgcctg
ctgtccactgaaggctcccagaacatcacttaccactgcaagaacagcatcgcctacctg
gacgaagcagccggcaacctcaagaaggccctgctcatccagggttccaatgatgtggag
atccgggctgagggcaacagcaggttcacgtacacggtgctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgacattgcacccatggacataggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
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integrated database retrieval system
