Myotis daubentonii (Daubenton's bat): 132228539
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Entry
132228539 CDS
T10294
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04151
PI3K-Akt signaling pathway
mdt04382
Cornified envelope formation
mdt04510
Focal adhesion
mdt04512
ECM-receptor interaction
mdt04820
Cytoskeleton in muscle cells
mdt04926
Relaxin signaling pathway
mdt04933
AGE-RAGE signaling pathway in diabetic complications
mdt04974
Protein digestion and absorption
mdt05146
Amoebiasis
mdt05165
Human papillomavirus infection
mdt05200
Pathways in cancer
mdt05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132228539 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132228539 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132228539 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132228539 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
132228539 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
132228539 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
132228539 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132228539 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
132228539 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
132228539 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
132228539 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132228539 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdt04147
]
132228539 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mdt00536
]
132228539 (COL4A1)
Exosome [BR:
mdt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132228539 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mdt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132228539 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
132228539
NCBI-ProteinID:
XP_059541091
LinkDB
All DBs
Position
2:complement(190822213..190962915)
Genome browser
AA seq
1670 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGGCAGSGCGKCDCQGVKGQKGERGLPGLQGV
IGFPGMQGPEGPQGPPGQKGDAGEPGLPGTKGTRGPPGISGYPGNPGIPGIPGQDGPPGP
RGIPGCNGTKGERGPLGPPGLPGFTGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPG
PPGIPGSPGFPGMQGPVGPPGYAGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVTGP
PGMPGEAQREEKGELITKGEKGIKGDPGSPGVPGYGEKGEPGKPGPRGKPGKDGEKGEKG
SPGFPGSPGFPGQPGQPGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGFPGPPGLRGEPG
PKGFPGQQGQPGPPGIPLPGQVGAPGFPGERGEKGDQGRPGVPLPGPSGRDGLPGPPGRP
GPPGPPAYIDGQVECQPGPVGDPGPPGIPGQPGLLGEVGEKGQKGEGCLVCDTTGLRGPP
GPQGPPGDRGFPGHPGAKGEKGLPGRDGLEGLPGPQGSPGLMGQPGAKGEPGEIYFDMRL
KGDKGDPGFPGQPGMPGRSGSPGRDGHPGLPGPKGSPGSAGLKGDRGPPGGVGFPGSRGD
IGPPGPPGYGPSGPAGDKGQAGFPGNPGLPGQPGPRGEAGRVMPLPGPPGADGLPGSPGF
QGPQGDRGFPGTPGRPGLPGEKGAVGQAGIGFPGPPGPKGIDGLPGDLGLPGNPGRPGIN
GFPGNPGPPGQKGEPGIGLPGLKGAPGLPGTPGTPGEKGNIGGPGIPGEHGAIGPPGLQG
IRGDPGPPGLQGPKGAPGVPGVGPPGLMGPPGRQGPPGSSGPPGVKGEKGFPGFPGLDMP
GPKGDKGTQGLPGLTGQSGLPGPPGQQGTPGLPGFQGLKGEMGVMGTPGQPGSPGPAGTP
GFPGEKGDHGFPGSAGPRGDPGVKGEKGAVGLPGKPGTMDKTDMDTMKGEKGDPGDKGQV
GPSGDKGSQGDPGTPGLPGKDGQAGHPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLP
GSPGEKGVPGIPGSQGAPGLPGEKGAKGEKGQAGRPGIGIPGQPGEKGDQGIAGFPGSPG
EKGEKGSLGLPGMPGPPGPKGSPGSVGYPGSPGLPGEKGDKGFPGLDGVPGIKGEPGHPG
QPGATGPPGPKGEPGNDGFPGSAGEKGEPGIPGRGVPGFPGSKGDKGSKGEVGFPGLAGS
PGIPGSKGEKGFSGPPGPQGQPGLPGAPGRPVEGPKGDRGPQGQPGLPGPPGPMGPPGLP
GIDGLKGDRGNPGWPGAPGPPGPKGDPGFQGMPGIGGTPGITGAKGDMGPPGVPGFQGQK
GLPGLQGIKGDQGDQGFPGSKGLPGPPGPPGPYQIVKGEPGLPGPEGPAGMKGFPGPPGP
KGQQGVTGSVGIPGPPGSPGFDGAPGQKGERGPSGPPGPRGFPGPPGPDGLPGSMGPPGT
PSVDHGFLVTRHSQTTDDPQCPPGTKILYNGYSLLYVQGNERAHGQDLGTAGSCLRKFST
MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDSIRPFISRCSVCEAPAMVMA
VHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR
GTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgcccgcagcccttctgctccacgag
gagcgcagccgagccgctgcgaagggtggtggatgtgctggctccggctgtgggaaatgt
gactgccagggagtgaagggacaaaagggtgaaagaggcctcccagggttacaaggtgtc
attggatttccaggaatgcaaggacctgaggggccacagggaccacctggacagaaggga
gatgctggagaaccaggactgccaggaacaaaagggacaagaggacccccaggaatatcc
ggttaccctggaaacccaggaattcctggtattcctggacaagacggtcccccaggtccc
cgtggtatcccaggatgcaacgggacaaagggtgaacgagggcccctgggacctcccggt
ttgcctggattcactggaaatcctggaccaccagggttacccggaatgaagggggatcct
ggtgaaatacttggccacgtgcccgggatgctgctaaaaggtgaaagaggatttcccgga
cccccaggaataccaggttcaccaggattcccagggatgcaaggtcccgtaggccctcca
ggatatgccggaccaccaggtccccctggccctcctggccctccaggtgaaaagggtcaa
atgggcttaagttttcaaggaccaaaaggtgaaaaaggcgatcagggggtcactggccct
ccaggaatgccaggagaggctcaaagggaagaaaaaggagaacttatcactaaaggagag
aagggtattaaaggtgaccctggatctccgggagtgccagggtatggagagaaaggtgaa
cctggaaaaccaggaccccgaggaaagcctggaaaagatggtgaaaagggggaaaagggg
agtccggggtttcccggctccccagggttcccaggacaaccaggacaaccaggctttaag
ggagacaaaggtgaagcaggtcctccaggcccacctggaattgtgatcggcacaggaccc
ttgggagaaaaaggcgagaggggcttcccagggcctccggggttgagaggcgagccaggg
cccaaaggtttcccaggacaacaaggccagccaggccccccaggcatcccgctgcctggg
caggtcggtgctcccggcttccccggcgaaagaggagaaaaaggtgaccaaggacgtcca
ggggtgcctttgccaggaccaagcggaagagatgggctcccgggccctcctgggcgcccc
ggccctcctgggccgccagcctacatagatggacaagtggaatgccagcctggaccagtc
ggtgatccgggtcctcctggaattccagggcaaccaggattgttgggtgaagttggagag
aaaggtcaaaaaggagagggttgccttgtctgtgacacaacaggacttcgtggacccccc
gggccacaggggcccccaggagatagaggtttcccggggcatccaggggccaagggtgag
aaaggtctacctggcagggacggtctggaaggattgcctggccctcaaggttcaccgggg
ctgatgggccagccaggagccaagggagagcctggtgagatttactttgacatgcgactc
aaaggtgacaaaggagacccaggcttcccaggacaacccggcatgccaggcagatcaggg
tctcccggaagagatggccatccaggtctgcccggccccaaaggctccccgggttcagca
ggattaaaaggcgaccgtggcccccccggaggagttggatttcccggcagtcgtggtgac
atcggccctcctgggcctccagggtatggcccaagtggccccgctggtgacaaaggacaa
gcgggcttcccgggaaatcctggactccccggccagccaggtcccaggggtgaagcagga
agagtcatgcctttacctggcccccctggagcagatggacttccgggttcccccggtttc
caagggccccaaggtgaccgtggtttccctggaaccccaggaaggcctggcctcccagga
gagaagggcgctgttggccaggcggggattggatttccagggcctccaggccccaaaggc
attgatggcttgcccggagatctgggacttcctgggaatccaggtcgcccaggaattaat
ggcttccctggcaacccaggtccacccggccagaagggagagcccgggattggtctgcca
ggactcaaaggagcgccaggccttccaggcactcctggcacacctggggagaaggggaac
atcgggggaccaggcattcctggagagcatggagccatagggccccccggccttcaggga
atcagaggtgacccaggacctcctggattacaaggtcccaaaggagctccaggagttcct
ggagttggtccccctggattgatgggcccccccggaagacagggaccaccaggatcctca
ggcccacctggagtgaaaggagagaagggtttccccggattcccaggtctggacatgcca
ggacccaaaggagataaaggcactcaagggctccccggcctaactggacagtcggggctt
cctggtcctcctggacagcagggcacgccaggacttcctgggtttcaaggtctcaaggga
gagatgggcgtcatggggaccccagggcagcctggctctccaggaccagcgggcacgcca
ggatttccgggtgaaaaaggggaccatggctttccgggctctgcaggacccaggggagac
cctggtgtcaagggtgaaaaaggagctgttggtctccctggcaaacctggaaccatggat
aaaactgacatggacaccatgaagggtgaaaagggagatccaggagataaaggacaagtt
ggtccaagtggtgacaaaggatctcaaggagaccctgggaccccaggactgcctggaaag
gacggccaagcagggcatcctgggcagccaggacctaaaggtgatccaggcattagcgga
acaccaggttctccaggacttcccggaccaaaaggatcggttggtggaatgggcctgcca
ggatcacctggagagaaaggtgtgcctggaatccctggctctcagggggcccctggctta
cctggagagaaaggagcgaaaggggagaaggggcaagcaggccggcctggcattggaatt
ccgggacagcctggggaaaagggagatcaaggcatagcaggtttcccgggaagtcctgga
gagaagggagaaaaaggaagcctcgggctcccaggcatgcccgggcctccgggccccaaa
ggatcaccaggaagtgttggctatccaggaagcccggggttgcctggagaaaaaggtgac
aaaggcttcccgggattggatggtgtccctggcatcaaaggagaaccaggtcatcctgga
cagcctggtgcgacaggcccacctggcccgaaaggggaacccggcaatgatggatttcca
gggtcggcgggagagaagggtgaaccaggtatacccggaagaggcgtcccagggtttcca
gggtccaaaggagacaaaggctcaaagggtgaagtgggtttcccaggattagctgggagc
ccaggaattcctggatccaaaggagagaaaggattctcgggtcctccggggccgcaagga
cagccaggattgccgggagctccgggccgccccgtggaggggcccaaaggagaccggggc
ccgcagggacaacctggcctgccagggcctccgggaccaatggggcctccagggctccct
gggattgatggactgaaaggtgacagaggaaacccaggctggccaggggcccctggtcct
ccaggacccaagggagacccaggattccaaggcatgcctgggattggtggtactccagga
atcacaggtgctaagggtgatatgggacctccaggagttccaggttttcaaggtcagaaa
ggtctccctggccttcagggaattaaaggagatcaaggagaccaaggtttccctggatct
aaaggtcttccaggtccccctgggcccccgggtccctaccaaattgtcaaaggggagcca
gggctccctggtcctgaaggtcctgccggtatgaaagggtttccgggacctccaggcccc
aaaggacagcaaggtgtgacaggatccgtgggcatacctggaccaccaggtagtcccggc
tttgatggtgcccctggccagaaaggagagaggggaccctctggacctcctggtccaaga
gggtttccaggaccacccggccctgatgggttgccaggatccatgggtcctccaggcacc
ccatccgttgatcacggcttccttgtgaccaggcacagtcaaacaacagatgatccgcag
tgtcctcccgggaccaaaattctttacaatgggtactctttgctctatgtgcaaggcaat
gaaagggcccacggacaggacttaggcacggctggaagctgcctgcgcaagttcagtacc
atgcccttcctgttctgcaacatcaacaatgtctgcaactttgcctcccgaaatgattat
tcctactggttgtccaccccggagcccatgccaatgtccatggcacccatcgccggggac
agtattagaccgtttattagcaggtgttctgtgtgtgaggctccagccatggtgatggct
gtgcacagccagaccattcagatcccgcagtgccccaacgggtggtcctcactctggatt
ggctattcctttgtgatgcacaccagcgctggtgccgaaggttctgggcaagccctcgca
tcccccgggtcctgtctggaagagtttagaagtgcgcccttcatcgagtgccacggccgt
gggacttgtaattactatgcaaatgcttacagcttttggcttgccactatagagagaaat
gagatgttcaagaagcccacgccgtccaccttgaaggccggggagctgcgcacgcacgtc
agccgctgccaagtctgtatgagaagaacataa
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