Myotis daubentonii (Daubenton's bat): 132228579
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Entry
132228579 CDS
T10294
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013
Nucleocytoplasmic transport
mdt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132228579 (UPF3A)
03015 mRNA surveillance pathway
132228579 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132228579 (UPF3A)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132228579 (UPF3A)
mRNA cycle factors
P-body specific factors
132228579 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
132228579
NCBI-ProteinID:
XP_059541196
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All DBs
Position
2:193916900..193935430
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AA seq
486 aa
AA seq
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MRSEKEGAGGSGVAVAARSQSGRERTSAAEVHVPRESPRREAGAPPALSSSGAGSAGRPR
EEKKTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTGDLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDNKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIDDDPEYKKF
LETYCVEEEKTSANPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRIREEEKRKKREEEKCKRKETDKQKKAAEKEVRIKLLKKPEKGEEAATEKPKE
PGEDIESGEGQWEASPGCAVGKAKPRESLLEERREKSQNDSDKEQKDMERKFREKELETQ
RYHSDDSRKLRAHYEFDKFSRRNEEEMKPGKGFTPDRGKTGSQDRGVPVEAAERPGREQK
SEDSPAPRKERVRNKQDRPALPLYQPGARMRARECGGRFSEEGRDGRRAEAEDSAGAGSK
KSKEAE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagaaggagggggccggaggctccggcgtggccgtcgctgcgcggagccag
agcggaagggagaggacgtccgccgcggaagttcacgtcccccgggagtcgcctcggcga
gaggctggggccccgccggccttgtcctccagcggtgccggcagcgcaggcagacctcgc
gaggagaagaagacggtcctgagcaaggtagtcatccggcgccttccacccagcctcacc
aaggagcagctggaagagcaactacacccactacctgcacatgattactttgaattcttt
actggggatctcagtctttatcctcatctctactccagagcatacattaattttagaaat
cctgacgacattcttcttttcagagatcggtttgatggctatatcttcattgacaacaaa
gggctagaataccccgcagtggtagagttcgctccattccagaagatagccaaaaagaag
ctgaagaaaaaagatgccaaaaccggaagcattgacgatgatccagaatataagaagttt
ttagaaacttactgtgtggaggaagaaaaaactagtgccaatcccgaaactcttctggga
gacatagaggcaaagacaagagaacttattgctagaagaaccacacctcttttggaatac
attaaaaacagaaaattagaaaagcagaggattcgagaagagaagcgagaagagcgaagg
cgaagggaattggaaaagaaacgcatacgtgaagaagaaaaaagaaagaaaagagaagaa
gaaaaatgtaagagaaaagaaacagataagcaaaagaaagctgctgagaaagaagtaagg
attaagcttcttaagaaaccagaaaagggagaggaagcagccactgagaaaccaaaagaa
cctggagaggacattgagagtggagagggacagtgggaagccagtcctggctgcgctgtg
gggaaggccaagccccgggagagcctgctggaggagcgcagggaaaagtcacaaaatgac
agtgataaagagcaaaaggatatggagagaaaatttcgagaaaaagaacttgaaacacaa
agataccactcggatgatagcagaaagcttagagctcactacgagtttgacaagttttca
agaagaaatgaagaagagatgaaaccggggaaaggattcaccccagacagagggaagacg
gggagccaggaccgtggagtcccggtggaagcagcagagagaccggggagagaacagaag
agtgaggacagcccggcccccagaaaggagagagtgcgaaacaagcaggaccggccggcc
ttgccactgtaccagccaggagctcgcatgagagcacgagaatgtggtggaagattctcg
gaggagggccgagatgggaggagggctgaggcagaagattcagcgggggctggctccaag
aagagcaaagaggcagaatga
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