Myotis daubentonii (Daubenton's bat): 132229978
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Entry
132229978 CDS
T10294
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04974
Protein digestion and absorption
Brite
Exosome [BR:
mdt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132229978 (COL18A1)
Proteoglycans [BR:
mdt00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
132229978 (COL18A1)
Glycosaminoglycan binding proteins [BR:
mdt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132229978 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132229978
NCBI-ProteinID:
XP_059542677
LinkDB
All DBs
Position
3:9274854..9359042
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AA seq
1490 aa
AA seq
DB search
MAPDPSGRLGLPLPLLLLLTCCLAATRADLLDWLWSTNTDRPTTSPVPVATSSPPVQPTE
DTTTQVAPQDGPTEQGTAPTSPELPLESLEAGQGEASTARPASPASPDTKEENLAGVGAM
ILNVAMGIRNFVQLWGNSTPAENATGMEMPTLATPTGPLTFPVPSSAPQENGTTPWLTSG
TLSSPDTKRTEAGSLPVPTQPLPSPDRPRTLLGEPSVPPKSPEGVVTEVGLLQLLGEPLP
QQVTQIDDPDVGPAYVFGPDANSGQVARYHFPSPFFRDFSLFFHVQPATEAAGVLFAITD
AAQAVVSVGVKLSGVSDGQQHIQLLYTEPGAARTRTAASFALPAFTGQWTRFALSVDDDT
VTLFVDCEKIQGVSLARSPRALELEPGSGFFVAQAGEADPDKFQGMIAELRVRSDPQVSP
MHCLEDDDDDDDGASGDFGSGLAENPELLKKEEGAPLKPSPPEAPPVTSPPLAEGSHSED
SRTEEIEEQTTVSILGAQTLPGSSTVITWDSSHVLEEGLAGPVVQSPHARAVPGPQGPPG
PAGPPGKDGAPGRDGEPGDPGEDGRPGDIGPQGFPGTPGDVGPKGEKGDPGVGPRGPPGP
QGPPGPPGPSFRHDKLTFIDMEGSGFSGDPESLRGPRGFPGPPGPPGVPGLPGEPGRFGV
NSSVIPGPAGLPGVPGRDGHPGIPGPPGPPGTPGKDGRPGEAGQKGSLGKVGTPGPKGNK
GDPGPMGAPGENGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWLTARGTDG
LQGPPGKPGVKGDPGIAGPPGTKGEVGADGPPGFPGLPGKEGVAGAQGPKGEKGTQGEKG
DPGKDGVGQPGPPGPPGLPGPIVYVSEEQDRAVSVTHGVKGQPGYAGLPGPAGPKGDTGV
SGQPGPPGPKGEKGEPGMVFSPDGRVLPPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPG
RPGRPGMNGFKGEKGEPGDASVGFGARGPPGLPGPPGPPGPPGLPGNPVYDSNAFVESGP
VGPPGLPGHQGPSGPKGDKGEVGLPGPPGQFPFDFLQLEAELKGDKGDRGDTGQKGERGE
PGGGGFFGSGVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGP
PGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGTLGTSSGVRIWPTYQTMLDKVPEVPEG
WLIFVADREELYVRVRNGIRKVLLEARTPLPRGTDNEVAALQPPLVQLHEGNPHPRWELP
PSTSRPWRADDILVRPPRLLDPQPYPGVPHHGSYVHSRPAHPTGAPAHTHHDFQPVLHLV
ALNGPQPGGLRGIRGADLQCFQQARAAGLAGTFRAFLSSRLQDLYSIVRRADRATVPIVN
LRDEELFPNWEALFSGSQGQLKPGARIFSFDGRDVLQHPAWPQKSVWHGSDPSGRRLTES
YCETWRTEATTATGQASSMLTGRLLGQKAASCHNAFIVLCIENSFMTSSK
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggccgcctgggcctgccgctgccgctgctgctgctgctcacc
tgctgcctcgctgccacccgggcggatctgctggactggctgtggtccacgaatacggat
cggcccaccacctcccccgtccccgtggccacaagcagcccacctgtgcagcccacagag
gataccaccacacaggtagcccctcaggatggccccactgagcaggggacagcgcctacc
agccccgagctgcccctggagagtctggaggctggccagggcgaggcctccactgcccgt
cctgcctccccggcgagcccggacacgaaggaggagaatcttgctggcgtcggagccatg
atcctgaacgtggctatgggtatccggaactttgtccagctctggggtaatagcaccccc
gccgagaacgctaccggaatggagatgccaacacttgcgacccccacaggccccctcacc
ttcccagtgccctccagcgccccccaggagaacgggaccactccctggctgaccagtggg
accctgagctctccggacaccaagaggactgaggccggcagcctgccagtgcccacccag
ccactaccctccccggacaggccccggacactactcggggagccctcggtgccaccgaag
tccccagagggagtggtcacagaggtggggctcctccagctgctcggggagcccctgccc
cagcaggtcacccagattgatgaccccgacgtgggaccagcctacgtctttggtccagat
gccaacagcggccaggtggcccggtaccacttccccagcccgttcttccgtgacttctcg
ctgttcttccacgtgcagccggccaccgaggccgcgggggtgctgttcgccatcacggat
gcagcccaggcagtggtctccgtgggcgtgaagctgtcgggcgtgagtgacggccaacag
cacatccagctcctgtacaccgagccgggcgcggcccggacacgcacggcggccagcttt
gccctgcccgccttcaccggccagtggacgcgctttgccctcagtgtggacgatgacacc
gtgacgctctttgtggactgcgagaagatccagggggtgtccttggcgcggtccccacgc
gccctggagctggaacccggctccggcttctttgtggctcaggctggggaagcggacccc
gacaagttccaggggatgattgcggagctgagggtacgcagtgacccccaggtgagcccc
atgcactgcctggaggatgatgacgacgatgatgatggggcgtcaggggacttcggaagt
gggctggcggagaacccggagcttctcaagaaggaagagggagcacccctaaagcccagc
cctcctgaggctcccccggtcacttctcctcccttggctgaaggcagccactcagaagat
tccagaacagaagaaatcgaggaacaaaccactgtgtctatattgggagctcagaccctt
cctggctcaagtacagtcatcacctgggacagcagccacgtcctggaagagggtctcgct
ggccccgtggtgcagagcccccatgcacgggctgtccctgggcctcaggggccccctgga
cccgcggggccaccagggaaggatggcgcccctggaagggacggtgagccaggcgaccct
ggggaagacggaagacctggcgacataggcccgcagggcttcccgggaaccccaggagac
gtgggccccaagggtgagaagggggatcctggggttgggccaagaggacccccaggaccc
caagggccgccggggccaccaggaccctccttccgacacgacaagctgaccttcatcgac
atggaggggtccgggttcagcggtgacccggagagccttcggggcccgagaggtttccct
ggcccccccggcccccccggcgtcccaggccttcccggagagccaggccgattcggggtg
aacagctccgtcatcccaggacccgcaggccttcccggtgtgcctgggcgggatggacac
cctgggatccccggccccccaggacctccaggaaccccaggaaaagacgggcggccagga
gaggccggccagaaaggcagccttggcaaagtgggcaccccaggacctaagggaaacaag
ggagaccccggccccatgggtgctcctggagagaacggcttggcaggagcccccggacca
gcaggaccgccaggcccccccgggccccccgggcctccaggaccaggacttcccgcgggg
tttgatgacatggaaggctccgggggacccttctggttgacagcccgaggcactgatggg
ctgcagggaccacccggcaagcctggggtcaagggggatcctggaatagctggcccacca
gggaccaagggagaagtcggtgcagacggaccccccgggtttcctggccttcccggcaaa
gagggcgtagctggagcccagggaccaaaaggagaaaaagggacccagggagagaaaggt
gacccagggaaggacggagtggggcagccagggccccccgggccccccggactcccgggg
cccatcgtctacgtgtcggaggagcaggacagagcggtgtccgtaacccatggcgtcaag
ggccagccagggtacgcaggcctccccggaccagctgggccgaagggagacacgggcgtc
agtggccagccaggccccccgggacccaagggtgagaagggtgagcccggcatggtcttc
agtcccgacggcagagtgctgccccctgcccagaaaggagccaagggggagcccggcttc
cgaggacctccgggtccatacggacggcctgggcacaaaggagagattggcttccccggg
cgaccgggccgtcctgggatgaatggattcaaaggagagaaaggggagccaggagacgcc
agtgttggatttggtgcacggggtccacctggcctcccagggcctccagggccaccaggg
cctccaggccttcccgggaaccctgtctacgacagcaacgcatttgtggagtctggccct
gtgggacctcctggtttgccagggcaccaggggccttctggaccaaagggggacaaagga
gaagtgggcctgcctgggccaccaggccagttcccgttcgacttcctccagctagaagct
gaactgaagggggacaagggtgaccgaggggacaccgggcagaaaggagaaaggggtgag
cctgggggaggcggattcttcggctctggtgtgcctggaccccccggcccaccaggctac
cccgggattccgggtcctaaaggagagagcatcaggggccagcccggcccacctggacct
cagggaccccctggcattggctatgaagggcgccaggggcctcccggaccacctggccct
ccagggcccccagggcccccgtcctttcctggcccctacaggcagactatcagtgttcct
ggccccccaggcccacctgggcccccaggaccccctggaaccctgggcacctcctcaggg
gtgaggatctggcccacgtaccagaccatgctggacaaggtgcccgaggtgcccgagggc
tggctcatcttcgtggctgacagggaggagctgtatgtccgcgtccgaaatggtatccgg
aaggtcctgctggaggcccggacgccactcccgcgtgggacggacaacgaagtggccgcc
ttgcagcccccgctggtgcagctgcacgagggaaacccgcacccccggtgggaactgccc
ccctccacctcacgaccctggcgggcagatgacatcctggtcaggcccccacgcctgctg
gacccccagccctaccctggagtcccacatcacggctcctacgtgcactcccggccagcc
caccccacgggtgctcccgcccacacccaccatgacttccaaccggtgttgcacctggtc
gcactcaacgggccacagcctggcggcctgcgtggcatccgtggcgccgacctccagtgc
tttcagcaggcgcgtgcggcagggctggcaggcaccttccgtgccttcctgtcatcgcgc
ctacaggacctctacagcattgtgcgtcgtgccgaccgtgcgaccgtgcccatcgtcaac
ctcagggacgaggagctgtttcccaactgggaggccttgttctcgggctcccagggccag
ctgaagccgggggcccgcatcttctccttcgacggcagagacgtgctgcagcaccccgcc
tggccacagaagagtgtgtggcacggctcagaccccagcgggcgccggctgaccgagagc
tactgtgagacgtggcggactgaggccacaacagccacgggccaggcctcctccatgctg
acgggcaggctgttgggacagaaagccgcgagctgccacaacgccttcatcgtcctctgc
attgagaacagcttcatgacctcctccaagtag
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