Myotis daubentonii (Daubenton's bat): 132232538
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Entry
132232538 CDS
T10294
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013
Nucleocytoplasmic transport
mdt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132232538
09122 Translation
03013 Nucleocytoplasmic transport
132232538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132232538
03041 Spliceosome [BR:
mdt03041
]
132232538
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132232538
Spliceosome [BR:
mdt03041
]
Complex C
Other components
EJC/TREX
132232538
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132232538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
132232538
NCBI-ProteinID:
XP_059547906
LinkDB
All DBs
Position
4:complement(415934..420925)
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AA seq
598 aa
AA seq
DB search
MSPTWPRFSVPEARTRFTKSTREALNNKNIKPLLNTFSQLPGTEDEKKCTLDQALRGVLQ
EEIINHSSCENVLAIISLAIGGVTEGICTASTPSVLLGDVLECLPLDQCDTTFTFVERNV
ATWRSNTFYSAGKNYLLRTCNDLLRRLSKSQHTVLRARIQLFLARLFPLSERSGLNLQSR
FNLENVTVFNTNEQESTLGQKHAEDGEEGMDVDDKGEMGDDEAPTTCSIPMDYSLYRKFW
SLQDYFRNPVQCYEKISWKTFLTYSEEVLAVFKNYKLDDTQASRKTMGELKTGGEHVYVA
KFLTSEKLLGLQLSDSNFRRHILLQYLILFQHLKGQVKSKSSKDVLTDEQSLWIEGTTKS
VYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPRRAVRKRTAP
EDFLGKGPNKKILKGKEALTSLWDPCPDNMEACKSNPAGYLPTLEEFFEEAIEQADPESM
IENEYKVVNNPNYGWRALRLLARRSPHFFQPTKQQFKSLPEYLENMVLKLAKESPPPSEE
IKTGEGEDEEDNDAVLKENESPDARRDRPVPGXKIEILAHKLGEQWNTHHSSSGLPDN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctacatggccacgcttcagtgtacccgaagcgcggacgcggttcacgaagtct
accagagaagccctgaacaacaaaaatatcaagccattgttgaataccttcagccagtta
cctggaactgaagatgaaaaaaaatgtacccttgaccaagctctcagaggtgttctgcaa
gaagaaattataaaccattcatcgtgtgaaaatgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgcaccgcatctacaccttctgtattgttgggagacgtt
ttggaatgtctccctttggatcagtgtgacacaacattcacgtttgtggagagaaatgtt
gctacttggagatcaaatacattctattccgctgggaaaaattatttactacgtacgtgc
aatgatctcttaagaagattatcaaaatcccagcacacagttttgcgtgcacgaattcaa
ctctttttggccaggcttttccctttatctgagagatccggtcttaacttgcagagtcgg
tttaatctggaaaatgtcaccgttttcaataccaatgagcaggaaagcaccttgggtcag
aagcacgctgaagacggagaagaaggaatggacgtagacgacaaaggtgaaatgggtgat
gacgaagctccaacaacttgctccattccaatggattacagcctgtatcgaaagttctgg
tcacttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaact
ttcctcacgtactcagaggaagtcctggctgttttcaagaattacaaattagatgacact
caggcctcaagaaaaacgatgggagaattaaaaacaggaggagaacatgtatacgttgca
aaatttttaacaagtgaaaagttgctgggtttacaactgagtgacagtaactttcgccga
cacattctactgcagtatctcattttattccaacatctcaagggacaggtgaaatccaaa
agttcaaaggatgttttaactgatgagcagtcactctggattgaaggcaccacaaaatcg
gtttatcaactgctatctgaaaacccacccgatggagagagattttcaaagatggtagag
catatattaaacactgaggaaaactggaactcgtggaaaaatgaaggctgcccaagtttt
gtgaaggaaagaacatcagatactaagccgaggagagcagtacgaaagagaacagcacca
gaggacttcctggggaaagggcccaacaaaaagattctgaaggggaaggaggcgttaaca
agcctttgggatccctgcccggataatatggaagcttgtaagtcaaacccagcaggctat
ctgccaactttggaggaattctttgaagaagccattgaacaggcagacccggaaagcatg
attgaaaatgaatataaggttgtgaacaatccaaattatggttggagagccctgagactg
ttagcacggagaagccctcacttcttccagccaaccaaacagcagttcaaaagtttgcca
gaatatctcgaaaacatggtgctaaagctagcaaaggaatcaccaccgccttcagaagaa
ataaaaacaggtgagggtgaagacgaggaagataacgatgctgtactgaaggaaaatgaa
agccctgatgctcgccgagacaggcctgtaccagggnggaaaatagagatacttgcccac
aaattgggtgaacaatggaacacacaccacagttcttccggtcttcctgataattga
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