Myotis daubentonii (Daubenton's bat): 132233081
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Entry
132233081 CDS
T10294
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04612
Antigen processing and presentation
mdt05145
Toxoplasmosis
mdt05152
Tuberculosis
mdt05164
Influenza A
mdt05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
132233081 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
132233081 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
132233081 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
132233081 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
132233081 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdt01001
]
132233081 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mdt04054
]
132233081 (CIITA)
Enzymes [BR:
mdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132233081 (CIITA)
Protein kinases [BR:
mdt01001
]
Serine/threonine kinases: Other
TAF1 family
132233081 (CIITA)
Pattern recognition receptors [BR:
mdt04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132233081 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
132233081
NCBI-ProteinID:
XP_059549138
LinkDB
All DBs
Position
4:21956893..22010162
Genome browser
AA seq
1248 aa
AA seq
DB search
MPCSVVCCLHGGELDRNQGDELPASQGVQITCPWAGWCPRSRGRPGGAQGCRGATEVLLR
SHVVDAAGGGLDACLLPGLVQASRRRMKMKEKKGSCRGWRQRGQVTGHPRLTIAPELSEG
EAASSAALRASPGNSGSGQCTTMELGPLEGGYLELLNSNADPLQLYHLYDQMDLAGEEEI
DLCSEPDTDTINCEQFSRLLCDIESDEETKEAYANIAELDQYVFQDSQFEGLSKDIFIEH
IGLEEMISESVEMLEEAAQKSQKRPFPEELPADLKHRKLAEPLTVPMVTGTFLVGPVSDS
SALPCPSPPALFNKEPTSVQTRLEETVLTPAPPSSSLLSCLGLPAGSIHIIPTLPALPQG
LWQISGAGTEVSSILIYQGEMPQAPPSSSPAIPSLPKSPGRPGSTSPFAPAAADLPSMPE
PALTSRGNVTEDEMSPTKGRAARKVSSKLPKYPESVEQFRRSLRAKYQAKPAGLEDILVE
VDLMRARLERSSSKSLERELVILDWAEQQPAREGLAGVLLAASDCRRPRETQVIAVLGKA
GQGKSHWARAVSRAWACGQLPQYDFVFYLPCHCVDRPGDTYHLQDLLFSLGPQPLPGDSE
VFGHILRRPDRLLLILDAFEELEAQDGLLPSTCGPMSAAEPSSLRGLLAGLLQRKLLRGC
TLLVTARSRGRLAQSLSKADTLFQMAGFSAQQAETYVERYFEHLGATHQQERAVALLRGQ
PLLLSHSHSPTVCRAVCQLSEALLELGEEVELPSTLTGLYVGLLGPAVRDSPPGALETMA
RLAWELGRRHHSTLREDQLPEKVRAWAVAKGLVQPCPGAAETELAFPSFLLQCFLAALWL
ALSSELKDKELPQYLALTPRKKRPYDNWLEGMPRFLAGLVFQPRARCLGALAGPAVASVV
DRKQKALTKYLKRLQPGLLQARRLLELLHCTHEASDAGLWRHVVQGLPTNLSFLGTRLTP
PDTHILGRTLETADRDFSLDLRRTGIDPSGLRSLVGLSCVTQFRAALSDTVGLWESLQQH
GEAKLLQAVEEKFTIEPFKANSVKDVEDLGNLVQIQRTRSSSEDIAGELPAIRDLKKLEF
ALGPVAGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVAQLSATFPRLKALETLNL
SQNNITDVGACKLAKALPSLAASLLRLSLYNNCICDVGAKSLAHVLPDMASLRVLDVQYN
KFTAAGAQQLAASLRKCPDVETLALWTPTIPFGVLEHLQQLDSRISLG
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcagcgtggtttgctgccttcatggtggtgagctagacagaaaccagggggat
gaactccctgcaagccagggcgtgcagatcacatgcccgtgggcaggctggtgcccccgc
agcaggggacgccctggaggcgcccagggctgtaggggtgccacggaggtgcttctgaga
agccacgtggtagacgcagcagggggaggcttggatgcctgtttactccccggtctggtc
caagcctcgcggaggagaatgaaaatgaaagagaaaaagggcagctgcagggggtggagg
cagcgtggccaagtcactggccatcccaggctcaccatagccccggagctgtcggaggga
gaggccgccagcagcgcggcactgcgcgcgagtccagggaacagcggcagtggacagtgt
accaccatggagctggggcctctagaaggtgggtacctggagctgctcaacagcaatgcc
gaccctttgcagctctaccacctctatgaccagatggacctggctggagaggaagagatc
gatctctgctcagaacctgacacagacaccatcaactgcgagcagttcagcaggctgttg
tgcgacatagaaagtgatgaagagaccaaggaagcttatgccaatatcgcggaactggac
cagtatgtgttccaggactcccagttcgagggcctgagcaaagacattttcatcgagcac
ataggattagaagaaatgatcagcgagagtgtggagatgctggaggaagcagcacaaaag
agtcagaaaagacccttcccagaggagctgcctgcagacctgaagcacaggaagctcgcc
gagcccctgactgtgcccatggtgactggcactttcctggtggggccagtgagtgactcc
tcagctctgccctgcccatcgccccctgctctgttcaacaaggagccaacgtccgtccag
acccggctggaggaaaccgtcctgacgcctgcgcccccctccagttccttgctgagctgc
ctgggtctccctgctgggtccatccacatcatccccaccctccctgctctgccccagggg
ctctggcaaatctcaggagccgggacagaggtgtccagtatactcatctaccaaggcgag
atgccccaagcacccccttccagcagcccagctatccccagcctcccgaagtccccaggc
cggcctggctccaccagccccttcgccccggcggcagctgaccttcccagcatgccagag
ccagccctgacctcccgtggaaacgtaacagaggatgagatgtcccccaccaaaggccgg
gcagctcgcaaggtctccagcaagcttccaaaatatcctgagagtgtggagcagtttcgc
cgttcactacgggccaagtaccaggccaagcccgcaggcctggaagacatcctggtggag
gtggacctgatgagggcccggctggagaggagcagcagcaagagcctggagagggaactg
gtcatcctggactgggcagagcagcagccagcccgcgagggtctggctggggtgctgctt
gctgctagcgactgccggcggccgcgtgagacacaggtgattgctgtgctgggcaaggca
ggacaggggaagagccactgggcccgggcagtgagccgggcctgggcctgtggccagctg
ccacagtacgacttcgtcttctacctgccctgccactgtgtggaccgaccaggggacacc
taccacctgcaggatctgctcttctccctgggcccgcagccgctgccgggggacagtgag
gtctttggtcacatcctgaggaggcctgaccgcctcctgctcatcctggatgcctttgag
gagctcgaagcccaagacgggctcctgcccagtacatgtggacccatgtcggcagcggag
cccagctccctccgagggctgctggccggcctcctccagcgcaagctgctgcgaggctgc
accctgctggtcacagcccggtcccggggccgcctggctcagagcctgagcaaggcggac
accctgttccagatggccggcttctcggcccagcaggctgagacctatgtggagcgctac
tttgaacatttgggggccactcaccagcaggaaagagccgtggcgctcctccggggccag
ccccttcttctcagccacagccacagccccactgtgtgccgggccgtgtgccagctctcg
gaggccctcctggagctgggagaggaggtcgagctgccttccacactgacgggactctat
gttggcctcctaggcccagcggtccgtgacagcccccctggggctctggagaccatggcc
aggctggcctgggagctgggccgcaggcaccacagcaccctgcgggaggaccagctccca
gagaaggtgagggcctgggctgtggccaaaggcttggtgcagccttgccctggggctgca
gagaccgagctggccttccccagcttcctcctgcagtgcttcctggcggccctgtggctg
gccctgagcagcgagctcaaggacaaggagctgccgcagtacttggcactgaccccgagg
aagaagaggccctatgacaactggctggagggcatgccgcgctttctggccgggctggtc
ttccagcctcgtgcccgctgcctgggagccctggccgggccggcggtggccagtgtggtg
gataggaagcagaaggcgctcaccaagtacctgaagcggctgcagccggggctgctgcag
gccaggcggctgctggagctgctgcattgtacccacgaggcgtcggacgctggcctttgg
cggcatgtggtgcaggggctccccaccaacctctccttcctgggtacccggctcacacct
ccggacacccacatcctgggcaggaccctggagacagcggaccgtgacttttctctggac
ctccgcaggactggcattgacccctctggactcaggagtctcgtgggactcagctgtgtc
acccagttcagggccgccttgagtgacacggtggggctgtgggagtccctacaacagcat
ggggaggccaagctactccaggcggtggaagagaagttcactattgagcctttcaaagcc
aattccgtgaaggacgtggaagacctgggcaaccttgtgcagatccagaggacaagaagt
tcctcagaagacatagccggggaactccccgccatccgggacttaaagaagctggagttt
gcgctgggccctgtcgcgggcccccaggctttccccaaactggtgaggatcctggaggcc
ttctcctccctccagcatctggacctggactcgctgagcgagaacaagatcggggatgag
ggtgtcgcgcagctctcagccaccttccctcggctgaaggccctggagacgctcaacttg
tcccagaacaacatcacggatgtgggcgcctgcaagctcgccaaagccctgccctcactg
gctgcatcccttctcaggctgagcttgtacaataactgcatctgtgacgtgggagccaag
agcctggcacacgtgcttccggacatggcgtccctgcgggtgctggatgtccagtacaac
aagttcacagccgctggggcccagcagctcgcggccagcctgagaaagtgccctgatgtg
gagacactggcgctgtggacacccaccatccctttcggtgtcctggaacacctgcagcag
ctggactcccggatcagcctgggatga
DBGET
integrated database retrieval system
