KEGG   Myotis daubentonii (Daubenton's bat): 132233229
Entry
132233229         CDS       T10294                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
mdt  Myotis daubentonii (Daubenton's bat)
Pathway
mdt03020  RNA polymerase
mdt03420  Nucleotide excision repair
mdt05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mdt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132233229 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132233229 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    132233229 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdt03021]
    132233229 (POLR2J)
   03400 DNA repair and recombination proteins [BR:mdt03400]
    132233229 (POLR2J)
Transcription machinery [BR:mdt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     132233229 (POLR2J)
DNA repair and recombination proteins [BR:mdt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132233229 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 132233229
NCBI-ProteinID: XP_059549551
LinkDB
Position
4:34530818..34535166
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctcctgccttcgagtcgttcttgttgttcgaaggcgagaagaagatcacc
attaacaaggacaccaaagtacccaatgcctgtttgttcaccatcaacaaagaagaccac
acactaggaaacattattaaatcacagctgttgaaggacccacaggtgctgtttgccggc
tacaaagttccccaccccttggagcacaagatcatcatccgtgtgcagaccacaccagac
tatagcccccaggaggccttcaccaatgccatcacagacctcattagcgagctctccctg
ctggaagagcgattccgggtggccatcaaagacaagcaagaaggaattgaatag

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