Myotis daubentonii (Daubenton's bat): 132233396
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Entry
132233396 CDS
T10294
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdt03021
]
132233396 (CHD1)
03036 Chromosome and associated proteins [BR:
mdt03036
]
132233396 (CHD1)
Transcription machinery [BR:
mdt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132233396 (CHD1)
Chromosome and associated proteins [BR:
mdt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
132233396 (CHD1)
SLIK complex
132233396 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
132233396
NCBI-ProteinID:
XP_059550007
LinkDB
All DBs
Position
4:59721071..59799283
Genome browser
AA seq
1713 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSGENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQHQQQQQQQVS
SNSGSEEDSSSSEDSDDTSSEVKRKKHKDEDWQMSASGSPSQSGSDSESEEEGDKSSCDE
TESDYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDDDEDYDNDKRSSRRQATV
NVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVE
ADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQE
TKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPY
SECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEG
LELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVP
LSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLK
DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEM
SALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE
ALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSI
KGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSST
PFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQ
FKVANFSNMDEDDIELEPERSSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAK
QISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSY
KKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVK
GPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDD
SNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLA
KKEAQRLSGAGGSKRRKARAKKNKSMKSIKVKEEVKSDSSPLLSEKSDEDDKLSESKSDS
KERSKKSSVSDPLVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKG
LSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKHWRKNLWIFVSKFTEFDARKLHKLY
KHAIKKRQESQQNNDQNSNVNVQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHH
KDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYNDREKHRKLDDHRSRDHRS
NLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQMDHRASSSGPRS
PLDQRSPYGSRSPFEHSIEHKSTPEHTWSNRKT
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacatagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcgggctctggatctggttccagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatcgggcagt
cagtcagagtctgagtcagacacttctggagagaacaaagttcaagcaaaaccaccaaaa
gttgatggagctgagttttggaaatccagccctagtattctggctgttcagagatccgca
atgctcaagaagcagcagcagcagcagcagcaccagcagcaacaacaacaacaagtttca
tctaatagtggatcagaagaggattcctctagcagtgaagattctgatgacacatcgagt
gaggtcaaaaggaaaaagcataaagatgaagattggcagatgtctgcatcaggatctcca
tctcaatctggttcagattcagaatctgaagaagaaggagataaaagcagttgtgatgaa
acggaatctgattatgaaccaaaaaacaaagttaaaagtagaaaacctcaaaatagatct
aagtcaaaaaatggaaagaagattcttggacaaaaaaagagacagattgattcatctgag
gaggacgacgatgaagattatgataatgataaaagaagttctcgtcgccaagcaactgtc
aatgtgagctataaggaagatgaagaaatgaaaacagattctgatgacctccttgaagtc
tgtggagaggatgttcctcaacccgaggaagaggaattcgaaacaatagaacgatttatg
gattgtcggattggaagaaaaggagctactggtgctacaacaaccatctatgcagttgaa
gcagatggtgacccaaatgcaggatttgaaaaaaacaaggaaccaggagaaatccaatat
ttaattaaatggaaaggatggtcccatattcacaatacttgggagacagaagaaaccctt
aaacaacagaatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggaa
acaaaaagatggttgaaaaatgcttctccagaagatgtggaatattataattgccagcaa
gaacttacagatgatctgcataaacagtatcaaatagtggagcgaataattgctcattcc
aatcaaaagtcagcagctggttatcctgattattattgcaaatggcagggccttccatac
tcagagtgcagctgggaggatggtgctctcatttccaaaaagtttcaagcatgtatagac
gaatattttagcagaaatcagtcaaaaaccactccttttaaagattgcaaagtattaaaa
caaaggccaagatttgtagccctaaagaagcagccatcctatattgggggacatgaagga
ttagaattaagagattatcaactgaatggtttaaattggcttgctcactcttggtgcaaa
ggaaatagttgcatacttgccgatgaaatgggccttggaaaaacaatacagacgatttca
tttctgaactatttgtttaatgaacatcaattatatggaccttttctattagtagtacca
ctctccactctcacgtcctggcaaagggaaattcagacatgggcttctcaaatgaatgct
gtggtttatttaggtgacattaacagtagaaacatgataagaactcatgaatggatgcat
ccccagaccaaacggttaaaatttaatatactgttaacaacttatgaaattttattgaag
gataaggcattccttggcggtctaaattgggcatttataggtgtagatgaagcacatcga
ttaaagaatgatgattctcttctgtataaaactttaatagactttaagtccaatcaccgt
ctccttatcactggaactcctctacaaaactccctcaaagagctctggtctttgcttcat
ttcattatgccagaaaagttttcttcctgggaagattttgaagaagagcatggcaaaggc
agagaatatggttatgcaagcctccacaaggaacttgagccgtttttgttacgcagagtt
aagaaagatgtggaaaaatcacttcctgctaaggttgagcagatattaagaatggaaatg
agtgctttacagaaacagtattacaaatggatattaactaggaattacaaagccctcagc
aaaggttccaagggcagtacctcaggctttttgaatattatgatggagctaaagaaatgt
tgtaatcactgctacctcattaaaccaccagacaataatgaattctataataaacaggag
gccttacaacacttaatccgtagtagcggaaaattgattcttcttgacaagctgttaatt
cgccttagagaaagaggcaatagagttcttattttttctcaaatggtgcggatgttagat
atacttgcagagtatttgaaatatcgtcaattcccctttcaaagattagatggatcaata
aaaggggagttgaggaaacaagctctagatcattttaatgctgaaggatcagaggatttc
tgctttttgctttccacaagagctggaggtctaggaattaatttagcctcagctgacact
gtggttatatttgattctgattggaatccacaaaatgatcttcaggcgcaggctagagct
catcgtatagggcaaaagaaacaggtgaatatttatcgtctagttacaaagggatcagtg
gaagaggatattcttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaa
agaatggacacaactgggaagacagtgctacatacaggttctgccccctcaagttctact
cctttcaataaagaagagttgtctgccattttaaagtttggtgctgaggaactttttaag
gaacctgaaggagaagaacaagagccccaggaaatggatatcgatgaaatcttgaagagg
gctgaaactcatgaaaatgaaccaggccctttaactgtaggagatgaattgctttcccag
ttcaaggttgccaacttttcaaacatggatgaggatgacattgagttggaacctgaacga
agttcaaagaattgggaagaaatcattccagaagatcaaagaagacgattagaagaggaa
gaaagacaaaaagaacttgaagaaatttatatgcttccaagaatgagaaactgtgctaag
cagattagtttcaatggaagtgaagggaggcgcagtagaagcaggagatattctggatct
gatagtgattcaatctcagaaaggaaaaggccaaagaaacgtggaagaccacggactatc
cctcgagagaatattaaaggatttagtgatgcagaaattcggcggtttatcaagagttac
aagaaatttggtggccctctagaaagattggatgcaatagctcgagatgctgaattagtt
gataagtcagagacagacctcagacgactaggagaattggtgcataatggttgcattaaa
gctttaaaggataattcttcaggaacagaacggacaggtggtagacttggaaaagtaaag
ggtccaacattccgaatatcaggagtacaagtgaatgccaaactagtcatctcccatgaa
gaagaattaataccattgcacaaatccattccttcagatccagaagaaagaaagcagtat
actatcccatgccatacaaaggctgctcattttgatatagactggggcaaagaagatgat
tccaatttgttaattggcatatatgaatatggatatggaagctgggaaatgattaaaatg
gatcctgacctcagtctaacacacaagattcttccagatgaccctgataaaaaaccacaa
gcaaaacagttgcagactcgggcagactacctcatcaaattacttagtagagatcttgcc
aaaaaagaagctcaaagactttctggtgcaggaggttcaaagaggagaaaagcaagagct
aagaagaataaatccatgaagtctataaaggtgaaagaggaagtaaagagtgattcttct
cctctgctctcagaaaagtccgatgaagatgataagttgagcgaatcaaaatctgatagc
aaagaaagatccaagaaatcttcagtgtctgatcctctagttcatattactgcaagtggt
gaaccagttcccatatccgaagaatccgaagagctggatcagaagacattcagcatttgt
aaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgataggcctgagaaaggc
ctttcagaaagagaacaactagagcatactagacagtgtttaataaaaatcggtgaccat
atcacggaatgtctgaaagaatatacaaatcctgaacaaatcaagcattggagaaaaaac
ctgtggatttttgtatctaagtttactgagtttgatgcaagaaaattacataagttatat
aagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccagaacagcaacgtg
aatgttcaagtgattagaaatccagatgtggaaagattaaaagagaatacaaatcacgat
gatagcagcagagacagttattcttctgatagacacttatctcagtatcatgatcatcat
aaagaccgacatcagggagattcttacaaaaagagtgactctaggaaaaggccctattct
tcttttagtaatggaaaagatcatcgtgattgggatcactacaagcaagacagcagatat
tataatgatagagagaaacacagaaaactggatgatcacagaagtagagatcacaggtca
aatttggaaggaagtttaaaagatagatctcattcagatcatcgctctcattcagatcat
cggttacattcagatcatcggtcaagttctgaatatacacatcataaatcttccagggat
tataggtatcactcagattggcaaatggaccacagagcttccagtagtgggcctagatca
ccactagatcagaggtctccttatggctccagatctccatttgaacattcaattgaacac
aaaagtacacctgagcatacctggagtaatcggaaaacataa
DBGET
integrated database retrieval system
