Myotis daubentonii (Daubenton's bat): 132234613
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Entry
132234613 CDS
T10294
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132234613 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132234613 (XAB2)
03041 Spliceosome [BR:
mdt03041
]
132234613 (XAB2)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132234613 (XAB2)
Spliceosome [BR:
mdt03041
]
Complex B
Other components
Prp19-related factors
132234613 (XAB2)
Complex C
132234613 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
132234613
NCBI-ProteinID:
XP_059551694
LinkDB
All DBs
Position
5:6323767..6342814
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AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYEMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcccggcaggagcggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttttctgtcaaatgctggctccgc
tacattgagttcaagcagggggccccgaagccccggctcaatcagttgtacgagcgcgcg
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcacgccgggcc
caggtgaagcatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgag
agggccttcgttttcatgcacaagatgccacgtctatggctagattattgtcagttcttg
gtggaccagggccgtatcactcacacacgccgcactttcgaccgtgccctccgggcgctg
cctatcacacagcactctcgtatttggcctctgtacttgcgcttcctgcgctcacacccg
ctacctgagacagccgtgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggaatacatcgagtacctcaagtcaagtgaccggctggacgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgcttcgtttccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggccttacccgcttcacagaccagctgggcaagctctggtgt
tcactggccgactactacatccgcagtggccattttgagaaggctcgggacgtgtacgag
gaggccatccggactgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagttcgaggagagcatgattgcagcaaagatggagaccacctcggagctggggcgggaa
gaagaggatgacgtggacttggaactgcgcctggcccgctttgagcagctgatcagtcgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccatgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacagtggaccccttcaaggccacgggcaaaccccatacgctgtgggttgca
tttgccaagttttatgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggatgacctggccagcgtgtggtgcgagtgtggg
gagctggagctccggcatgagaactacgaccaggccttgcggctgctgcggaaggcaaca
gcactgcccgcccgccgggctgagtattttgatggctcggagcctgtgcagaaccgtgtg
tacaaatcgttaaaggtgtggtccatgcttgccgacttggaggaaagccttggcaccttt
cagtctaccaaggctgtgtatgaccgtattctggacctgcgcatcgctaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tatgagcgtggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggctcgggacctcttt
gagcaggcgctggatggttgcccccccaaatatgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcacgcaatggccgtgtacgagcgcgccacc
caggccgtggagcccgcccagcagtacgagatgttcaacatctacatcaagcgggcagcg
gagatctatggagtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcccgggagatgtgcctgcggtttgcggacatggagtgtaagcttggagag
attgaccgcgcccgggccatctacagcttctgctcccagatctgtgaccctcggacaact
ggggccttctggcaaacatggaaggacttcgaggtacggcatggcaacgaggacaccatc
cgggagatgctgcgtatccgccgaagcgtgcaggccacttacaacacacaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagtgctacaggcactgtgtccgaccttgcc
cccgggcagagtggcatggatgacatgaagctactagagcagcgggcagagcagctggca
gccgaggctgagcacgaccagcccccacgggcccagagcaagatcctgttcgtgaggagc
gatgcatcccgggaggaactggctgagctagcgcaacaggccaacccggaggagatcgag
ctgggcgaggacgaggacgaggatgagatggacctggagcccaatgaggtgcggctggag
cagcagagtgtgccggctgctgtgtttgggagcctgaaggaggactga
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