Myotis daubentonii (Daubenton's bat): 132235300
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Entry
132235300 CDS
T10294
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132235300 (PTBP1)
03041 Spliceosome [BR:
mdt03041
]
132235300 (PTBP1)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132235300 (PTBP1)
Spliceosome [BR:
mdt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132235300 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
132235300
NCBI-ProteinID:
XP_059553411
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All DBs
Position
5:complement(33930613..33944061)
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AA seq
557 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSACVTNGPFIMSSNSASAANGNDSKKFKGDNRSTGVPSRV
IHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLSLAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIMSASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLGGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHL
NGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSVSEDDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagacatagcagttggtacaaagcggggatcggacgagctcttc
tctgcctgtgtcactaacggaccctttatcatgagcagcaactcagcctctgcagcaaac
ggaaatgacagcaaaaagttcaaaggtgacaacagaagtacaggtgtgccctccagagtg
atccatatccggaagcttcccagcgatgtcaccgagggggaggtcatttccctgggactg
ccttttgggaaggtcaccaacctcttgatgctgaaagggaaaaaccaggccttcattgag
atgaacacagaggaggcagccaacactatggtgaactactacacctcggtgacacctgtg
cttcgtggccagcccatctacatccagttctccaaccataaggaacttaagaccgacagc
tcacccaaccaggcacgggcccaggcggccttgcaggcagtgaactcagttcagtcgggg
aatctgtcactggctgcctcagctgctgccgtggatgccgggatggcgatggctggccag
agtccagtgctcaggatcatcgtggaaaacctcttctacccagtcaccttggacgtgctt
caccagatcttctccaagtttggcacagttctgaagattatcactttcaccaagaacaac
cagttccaggctctgctgcagtatgccgaacccgtgagcgcccagcatgctaagctgtcg
ctggatgggcagaacatctacaacgcttgctgtacactccgcatcgacttttctaagctc
accagcctcaacgtcaagtacaacaatgacaagagccgagactatacccgtcctgacctg
ccctctggtgacagccaaccctcactggaccagaccatggctgcagcctttggtgcacct
ggtataatgtcagcctctccatatgcaggagctggtttccctcccacctttgccattcct
caagctgcaggcctctcagttcccaatgtgcatggggccctggcccctctggccatccca
tcagcggcggcggcggcagcggcagctggccggatcgccatcccaggcctaggaggggct
ggaaattctgttctgctggtcagcaacctcaaccctgagagagtcacaccccaaagcctc
tttattcttttcggcgtgtatggcgatgtgcaacgggtgaagattttgttcaataagaag
gagaatgccttggtacagatggcagatgggagccaggcccagctggccatgagccacctt
aacggacataagctgcatggaaagcctgtgcgcatcaccctctccaagcaccaaaacgta
cagctgccccgggagggccaggaggaccagggcctcaccaaagactacgggaactcaccc
ctgcaccgcttcaagaagcctggctctaagaacttccagaacatcttcccaccctcggcc
accctgcacctttccaacatcccgccctccgtatctgaggacgacctcaagatactcttc
tccagcaacggcggaattgtcaaagggttcaagttcttccagaaggatcgcaagatggcg
ctgattcagatgggttcagtggaggaggccatccaggcgctcatcgacctgcacaaccac
gacctgggagagaaccaccacctgcgggtgtccttctccaagtccactatctag
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