Myotis daubentonii (Daubenton's bat): 132235361
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Entry
132235361 CDS
T10294
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt00100
Steroid biosynthesis
mdt01100
Metabolic pathways
Module
mdt_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132235361 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdt01006
]
132235361 (FDFT1)
Enzymes [BR:
mdt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
132235361 (FDFT1)
Prenyltransferases [BR:
mdt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132235361 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
132235361
NCBI-ProteinID:
XP_059553596
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All DBs
Position
5:38140310..38166676
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AA seq
466 aa
AA seq
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MAAAACGTKAMSLFKRTLVLSPAAAPKGAGTPSRCCPWPSKDWTRGEGVCARLRRPAAAG
FLPQSHSCSSTTATSVCLLCPQDSLSSSLKTCYKYLHQTSRSFAAVIQALDEEMRNAVCI
FYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWRFMESKEKHRQVLEDFPTISLE
FRNLAMKYQTVIVDICRKMGFGMAEFLDKHVTSEEEWDKYCHYVAGLVGIGLSRLFSASE
LEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQQDGREFWPQEVWSKYVKKLGDFAKPEN
IDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFK
GVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPNSDSSSSKTRQIISTIRTQNL
PSCQLTSRSHYSPIYLSFLMLLAALSWQYVSTLSQVTEDYVQTGEH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgcctgcggcaccaaggccatgtccctcttcaagcggaccttggtgctg
agccccgccgcggcgcctaagggcgcgggcaccccctcgcgctgttgtccctggccttcc
aaggactggactcggggagagggcgtctgcgctcggctacggcgtccagcggctgccggc
ttcctgccccagtcccactcctgctcctcgacaactgctacctccgtctgtcttctctgc
ccgcaggactcgctcagcagcagcttgaagacttgttacaagtacctgcatcagaccagt
cgcagtttcgcagccgttatccaggcgctggatgaagaaatgcgcaatgcagtctgtata
ttttatctggttctccgagctctggacactctggaagatgacatgaccatcagtatagaa
aaaaaagtcccactgttacacaactttcactcttacctttacgaacctgactggcggttc
atggagagcaaggagaagcatcgacaagtgctggaggacttcccaacgatctccctcgaa
ttcagaaatctggctatgaaatatcaaacagtgattgtcgacatttgccggaaaatggga
tttgggatggccgagtttttggataagcacgtgacctctgaagaggagtgggacaagtac
tgccactatgttgccgggctggtgggaattggcctttctcgtctgttctcggcctcagag
ttagaagacccattagttggtgaagacatagagtgtgccaactccatgggcctgtttctg
cagaaaacaaacatcattcgtgattatctggaagatcagcaagatggaagagagttctgg
cctcaagaggtttggagcaagtatgttaagaagttgggtgattttgctaagccggagaat
attgacttggccgtacagtgtctgaatgaacttataaccaatgctctacatcacattcca
gatgtcatcacctacctttccagacttagaaaccaaagtgtgtttaacttttgcgctatt
cctcaggtaatggccattgctactttggctgcctgttacaataatcagcaggtgttcaaa
ggggtagtgaagattcgaaaaggacaagcagtaaccctgatgatggatgccaccaacatg
ccagctgtcaaagctataatataccaatatatggaagagatctatcacagaatccccaac
tcagattcatcttccagtaaaaccaggcagatcatctccaccatcagaacacagaatctt
cccagctgtcagctgacctcccgaagccactactcccccatttacctgtcgtttctcatg
ctcctggctgccctgagctggcagtatgtgagtaccctatctcaggtcacagaagactat
gtccagaccggagaacattga
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